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WormBase Tree Display for Expression_cluster: WBPaper00046121:endoderm_unique

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Name Class

WBPaper00046121:endoderm_uniqueDescriptionGenes uniquely expressed in endoderm, according to RNAseq studies on blastomere (with isolated AB, MS, E, C, D founder cells dividing in vitro) time course and whole embryo time course.
SpeciesCaenorhabditis elegans
AlgorithmGerm layers were assigned by correlating the average expression with germ-layer-specific patterns with a cutoff of 0.6 correlation with the following idealized vectors: endoderm = [00100]; ectoderm = [10000]; mesoderm = [01011], where the order is AB, MS, E, C and P3. Germ-layer genes were defined according to the sum of the genes identified by the clusters and are indicated in Fig. 2b. Authors further filtered the germ-layer gene sets by keeping only those genes whose expression was partitioned across the germ layers such that at least two-thirds of the expression was in that germ layer.
ReferenceWBPaper00046121
Based_on_WB_Release230
GeneWBGene00012554
WBGene00012970
WBGene00021817
WBGene00022200
WBGene00022307
WBGene00022813
WBGene00021322
WBGene00015981
WBGene00002257
WBGene00001559
WBGene00019730
WBGene00019298
WBGene00020962
WBGene00015055
WBGene00000211
WBGene00015303
WBGene00020593
WBGene00018860
WBGene00014000
WBGene00017574
WBGene00000116
WBGene00008706
WBGene00018877
WBGene00008802
WBGene00012538
WBGene00007653
WBGene00011094
WBGene00016403
WBGene00013905
WBGene00020082
WBGene00015517
WBGene00020624
WBGene00009453
WBGene00017443
WBGene00015664
WBGene00019057
WBGene00011936
WBGene00008255
WBGene00016958
WBGene00016881
WBGene00019895
WBGene00044564
WBGene00012144
WBGene00019212
WBGene00045212
WBGene00018911
WBGene00016023
WBGene00007769
WBGene00000966
WBGene00013650
WBGene00000789
WBGene00013761
WBGene00000118
WBGene00015913
WBGene00009389
WBGene00011108
WBGene00022497
WBGene00000391
WBGene00012777
WBGene00011821
WBGene00018841
WBGene00019986
WBGene00007394
WBGene00011124
WBGene00009522
WBGene00008954
WBGene00000968
WBGene00015783
WBGene00004875
WBGene00017448
WBGene00000984
WBGene00008258
WBGene00015894
WBGene00020865
WBGene00011361
WBGene00019022
WBGene00017089
WBGene00015088
WBGene00010870
WBGene00017447
WBGene00016282
WBGene00017327
WBGene00007509
WBGene00007508
WBGene00003846
WBGene00007810
WBGene00020307
WBGene00007753
WBGene00012531
WBGene00013497
WBGene00016052
WBGene00010524
WBGene00015767
WBGene00014206
WBGene00018931
WBGene00002138
WBGene00018718
WBGene00009998
WBGene00004198
WBGene00009057
WBGene00010386
WBGene00020972
WBGene00010540
WBGene00044280
WBGene00017427
WBGene00016294
WBGene00013884
WBGene00001505
WBGene00007558
WBGene00011903
WBGene00009274
WBGene00010597
WBGene00011003
WBGene00007507
WBGene00009156
WBGene00020532
WBGene00007072
WBGene00012494
WBGene00002137
WBGene00012122
WBGene00022125
WBGene00008607
WBGene00016599
WBGene00001984
WBGene00004193
WBGene00008583
WBGene00010296
WBGene00003773
WBGene00012235
WBGene00012834
WBGene00006470
WBGene00020378
WBGene00010134
WBGene00044034
WBGene00017698
WBGene00016595
WBGene00008803
WBGene00013575
WBGene00016429
WBGene00011868
WBGene00003861
WBGene00021852
WBGene00010899
WBGene00016877
WBGene00045397
WBGene00013906
WBGene00020343
WBGene00017197
WBGene00010328
WBGene00000967
WBGene00022130
WBGene00003526
WBGene00010083
WBGene00017335
WBGene00002139
WBGene00017473
WBGene00000111
WBGene00004197
WBGene00015122
WBGene00008227
WBGene00017303
WBGene00000172
WBGene00006367
WBGene00008719
WBGene00008091
WBGene00000858
WBGene00019830
WBGene00044743
WBGene00019720
WBGene00003643
WBGene00045400
WBGene00011102
WBGene00007557
WBGene00004059
WBGene00022683
WBGene00020788
WBGene00077768
WBGene00016798
WBGene00018779
WBGene00007533
WBGene00007904
WBGene00016721
WBGene00019674
WBGene00012201
WBGene00020765
WBGene00020837
WBGene00023432
WBGene00003730
WBGene00000991
WBGene00019232
WBGene00019373
WBGene00015650
WBGene00022196
WBGene00010256
WBGene00015906
WBGene00007070
WBGene00015381
WBGene00017012
WBGene00003409
WBGene00018286
WBGene00003647
WBGene00000831
WBGene00018465
WBGene00011083
WBGene00011147
WBGene00020182
WBGene00009155
WBGene00016146
WBGene00015389
WBGene00017496
WBGene00007650
WBGene00011207
WBGene00003849
WBGene00016734
WBGene00013541
WBGene00016848
WBGene00021879
WBGene00003978
WBGene00022682
WBGene00017334
WBGene00010983
WBGene00014057
WBGene00011339
WBGene00022415
WBGene00004191
WBGene00019060
WBGene00001099
WBGene00010850
WBGene00013560
WBGene00009048
WBGene00016368
WBGene00017374
WBGene00019493
WBGene00003786
WBGene00008542
WBGene00011831
WBGene00016866
WBGene00011850
WBGene00017184
WBGene00015692
WBGene00015859
WBGene00013963
WBGene00019963
WBGene00016034
WBGene00017434
WBGene00020688
WBGene00007236
WBGene00018912
WBGene00001761
WBGene00020175
WBGene00044797
WBGene00008712
WBGene00015671
WBGene00018216
WBGene00015057
WBGene00000882
WBGene00021589
WBGene00011423
WBGene00008755
WBGene00003943
WBGene00044901
WBGene00004228
WBGene00000981
WBGene00015220
WBGene00007409
WBGene00009947
WBGene00018406
WBGene00018690
WBGene00011938
WBGene00022245
WBGene00016838
WBGene00014669
WBGene00017027
WBGene00013873
WBGene00011756
WBGene00002255
WBGene00007362
WBGene00013257
WBGene00021325
WBGene00021252
WBGene00004238
WBGene00045252
WBGene00011427
WBGene00014192
WBGene00002234
WBGene00018146
WBGene00003721
WBGene00013227
WBGene00016365
WBGene00020280
WBGene00010063
WBGene00018085
WBGene00017893
WBGene00015623
WBGene00003877
WBGene00000799
WBGene00019644
WBGene00003844
WBGene00020592
WBGene00001506
WBGene00007455
WBGene00015369
WBGene00007811
WBGene00008669
WBGene00013484
WBGene00020029
WBGene00013693
WBGene00010924
WBGene00020137
WBGene00013946
WBGene00017108
WBGene00004092
WBGene00016332
WBGene00021148
WBGene00021060
WBGene00021983
WBGene00013875
WBGene00004058
WBGene00018374
WBGene00015284
WBGene00007593
WBGene00007228
WBGene00011517
WBGene00007680
WBGene00008548
WBGene00004789
WBGene00008564
WBGene00017651
WBGene00015802
WBGene00018602
WBGene00007881
WBGene00013594
WBGene00001157
WBGene00015400
WBGene00013716
WBGene00021430
WBGene00003769
WBGene00003941
WBGene00014697
WBGene00219316
WBGene00019516
WBGene00021128
WBGene00194917
WBGene00021566
WBGene00000067
WBGene00015064
WBGene00007130
WBGene00001149
WBGene00015956
WBGene00007689
WBGene00008226
WBGene00008336
WBGene00000302
WBGene00000515
WBGene00000776
WBGene00000786
WBGene00000788
WBGene00008829
WBGene00013284
WBGene00010266
WBGene00011869
WBGene00009741
WBGene00022861
WBGene00001250
WBGene00001310
WBGene00001330
WBGene00017687
WBGene00017302
WBGene00017537
WBGene00018210
WBGene00018489
WBGene00009796
WBGene00010336
WBGene00001501
WBGene00001578
WBGene00001758
WBGene00001790
WBGene00001819
WBGene00020509
WBGene00001564
WBGene00002054
WBGene00002057
WBGene00002058
WBGene00002067
WBGene00019477
WBGene00019479
WBGene00019599
WBGene00002259
WBGene00002273
WBGene00017123
WBGene00003727
WBGene00003625
WBGene00003635
WBGene00003659
WBGene00003669
WBGene00003607
WBGene00003996
WBGene00004013
WBGene00004096
WBGene00004194
WBGene00009560
WBGene00011181
WBGene00020007
WBGene00020022
WBGene00006416
WBGene00004860
WBGene00018398
WBGene00007384
WBGene00020139
WBGene00020401
WBGene00006603
WBGene00018350
WBGene00013197
WBGene00015141
WBGene00021048
WBGene00015479
WBGene00022412
Attribute_ofRNASeq
Associated_withLife_stageWBls:0000003
RemarkTissue specific: disection.