WormBase Tree Display for Gene: WBGene00003721
expand all nodes | collapse all nodes | view schema
| WBGene00003721 | SMap | S_parent | Sequence | T01G6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | nhr-131 | Person_evidence | WBPerson600 | |||||
| Sequence_name | T01G6.2 | ||||||||
| Molecular_name | T01G6.2a | ||||||||
| T01G6.2a.1 | |||||||||
| CE40113 | |||||||||
| T01G6.2b | |||||||||
| CE50745 | |||||||||
| T01G6.2b.1 | |||||||||
| Other_name | CELE_T01G6.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nhr-131 | ||||||||
| DB_info | Database | AceView | gene | 5A973 | |||||
| WormQTL | gene | WBGene00003721 | |||||||
| WormFlux | gene | WBGene00003721 | |||||||
| NDB | locus_tag | CELE_T01G6.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003721|UniProtKB=O16968 | |||||||
| family | PTHR45680 | ||||||||
| NCBI | gene | 187962 | |||||||
| RefSeq | protein | NM_001313252.3 | |||||||
| NM_070820.5 | |||||||||
| TrEMBL | UniProtAcc | A0A0K3AV42 | |||||||
| O16968 | |||||||||
| UniProt_GCRP | UniProtAcc | O16968 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (121) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00001384 | ||||||||
| 00029055 | |||||||||
| 00029056 | |||||||||
| 00029057 | |||||||||
| 00111681 | |||||||||
| 00111682 | |||||||||
| 00111683 | |||||||||
| 00111684 | |||||||||
| Ortholog (51) | |||||||||
| Paralog (218) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Expressed in intestine and pharynx. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T01G6.2a | |||||||
| T01G6.2b | |||||||||
| Corresponding_CDS_history | T01G6.2:wp156 | ||||||||
| Corresponding_transcript | T01G6.2a.1 | ||||||||
| T01G6.2b.1 | |||||||||
| Other_sequence (13) | |||||||||
| Associated_feature | WBsf646636 | ||||||||
| WBsf999175 | |||||||||
| WBsf1019081 | |||||||||
| WBsf231341 | |||||||||
| Transcription_factor | WBTranscriptionFactor000323 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00052149 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr2097 | ||||||||
| Expr1026173 | |||||||||
| Expr1031734 | |||||||||
| Expr1155784 | |||||||||
| Expr2014031 | |||||||||
| Expr2032271 | |||||||||
| Drives_construct | WBCnstr00035919 | ||||||||
| Construct_product | WBCnstr00035919 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (97) | |||||||||
| Interaction (14) | |||||||||
| Map_info | Map | V | Position | -19.9865 | |||||
| Positive | Positive_clone | T01G6 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4848 | |||||||
| 4815 | |||||||||
| 5039 | |||||||||
| 5368 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
