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Expression Dataset Locator

This tool allows browsing and downloading of data from ~7,000 genomic expression analyses published in ~400 nematode research articles. The search may combine specific platforms, species, tissues and research topics. For example, choosing 'RNAseq', 'C. elegans', 'Whole Animal' and 'aging' will return C. elegans RNAseq datasets related to aging, done in whole animals. Not making any selection is equivalent to choosing all. For example, if no "Platform" is specified, results from all platforms will be displayed. Likewise, choosing 'RNAseq' and 'proteomics' will return both RNAseq and proteomics datasets.

Our complete dataset collection is available for direct download.

1. Choose platform
Single-Cell RNA-Seq
tiling array

2. Choose Species
Brugia malayi
Caenorhabditis brenneri
Caenorhabditis briggsae
Caenorhabditis elegans
Caenorhabditis japonica
Caenorhabditis remanei
Pristionchus pacificus

3. Choose Tissue Specificity
Tissue Specific
Whole Animal

4. Choose Topic
DNA binding
DNA repair
RNA interference
RNAi gene function study
WT vs. mutant
dauer larval development
developmental time course
dosage compensation
embryo development
gene expression - general
gene silencing by miRNA
innate immune response
lipid metabolic process
natural variant
physical interaction
programmed cell death
response to chemical
response to hypoxia
response to osmotic stress
response to radiation
response to starvation
response to temperature stimulus
response to unfolded protein
space flight
vulval development