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WormBase Tree Display for Gene: WBGene00019644

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Name Class

WBGene00019644SMapS_parentSequenceK11D12
IdentityVersion2
NameCGC_namecpt-4Person_evidenceWBPerson3206
WBPerson3205
Sequence_nameK11D12.4
Molecular_nameK11D12.4
K11D12.4.1
CE12132
Other_nameCELE_K11D12.4Accession_evidenceNDBBX284605
Public_namecpt-4
DB_infoDatabaseAceViewgene5F502
WormQTLgeneWBGene00019644
WormFluxgeneWBGene00019644
NDBlocus_tagCELE_K11D12.4
PanthergeneCAEEL|WormBase=WBGene00019644|UniProtKB=O44619
familyPTHR22589
NCBIgene178889
RefSeqproteinNM_071947.5
TrEMBLUniProtAccO44619
UniProt_GCRPUniProtAccO44619
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:02WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
218 Jul 2005 13:34:00WBPerson2970Name_changeCGC_namecpt-4
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcpt
Allele (196)
RNASeq_FPKM (74)
GO_annotation00032963
00032964
00032965
00032966
00032967
00124453
Ortholog (39)
ParalogWBGene00000481Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00007175Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008629Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00009622Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011122Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011850Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012907Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00021703Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00020911Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00021002Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable carnitine O-palmitoyltransferase activity. Predicted to be involved in carnitine metabolic process and fatty acid metabolic process. Predicted to be located in mitochondrion.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSK11D12.4
Corresponding_transcriptK11D12.4.1
Other_sequenceJI170814.1
CSC02204_1
JI482264.1
JI473788.1
FD514214.1
Dviv_isotig19746
Associated_featureWBsf652601
WBsf668933
WBsf668934
WBsf999918
WBsf999919
WBsf1019580
WBsf1019581
WBsf233631
Experimental_infoRNAi_resultWBRNAi00050589Inferred_automaticallyRNAi_primary
Expr_patternExpr1026745
Expr1038482
Expr1154296
Expr2010517
Expr2028757
Drives_constructWBCnstr00025706
Construct_productWBCnstr00025706
Microarray_results (19)
Expression_cluster (308)
InteractionWBInteraction000437840
WBInteraction000503222
WBInteraction000504131
WBInteraction000578748
Map_infoMapVPosition-3.58473Error0.002569
PositivePositive_cloneK11D12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00026800
WBPaper00029292
WBPaper00042257
WBPaper00054451
WBPaper00062388
WBPaper00062948
WBPaper00064634
WBPaper00065727
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene