WormBase Tree Display for Gene: WBGene00021703
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| WBGene00021703 | SMap | S_parent | Sequence | Y48G9A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cpt-3 | Person_evidence | WBPerson3206 | |||||
| WBPerson3205 | |||||||||
| Sequence_name | Y48G9A.10 | ||||||||
| Molecular_name | Y48G9A.10 | ||||||||
| Y48G9A.10.1 | |||||||||
| CE37434 | |||||||||
| Other_name | Y48G9A.d | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| Y48G9A.e | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y48G9A.10 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | cpt-3 | ||||||||
| DB_info | Database | AceView | gene | 3D177 | |||||
| WormQTL | gene | WBGene00021703 | |||||||
| WormFlux | gene | WBGene00021703 | |||||||
| NDB | locus_tag | CELE_Y48G9A.10 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021703|UniProtKB=Q9N3N3 | |||||||
| family | PTHR22589 | ||||||||
| NCBI | gene | 190055 | |||||||
| RefSeq | protein | NM_065097.5 | |||||||
| TrEMBL | UniProtAcc | Q9N3N3 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N3N3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 18 Jul 2005 13:34:00 | WBPerson2970 | Name_change | CGC_name | cpt-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cpt | ||||||||
| Allele (152) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00093823 | ||||||||
| 00093824 | |||||||||
| 00093825 | |||||||||
| 00093826 | |||||||||
| 00093827 | |||||||||
| 00093828 | |||||||||
| 00125959 | |||||||||
| Ortholog (43) | |||||||||
| Paralog | WBGene00000481 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00007175 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00008629 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00009622 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00011122 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00011850 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00012907 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00019644 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020911 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021002 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable carnitine O-palmitoyltransferase activity. Predicted to be involved in carnitine metabolic process and fatty acid metabolic process. Predicted to be located in mitochondrion. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y48G9A.10 | |||||||
| Corresponding_CDS_history | Y48G9A.10:wp104 | ||||||||
| Y48G9A.10:wp130 | |||||||||
| Corresponding_transcript | Y48G9A.10.1 | ||||||||
| Other_sequence | CR04997 | ||||||||
| CJC10789_1 | |||||||||
| CRC12322_1 | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00056978 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00102595 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021264 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037276 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028322 | ||||||||
| Expr1160425 | |||||||||
| Expr2010516 | |||||||||
| Expr2028756 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (227) | |||||||||
| Interaction | WBInteraction000008988 | ||||||||
| WBInteraction000517886 | |||||||||
| Map_info | Map | III | Position | -15.3606 | Error | 0.04416 | |||
| Positive | Positive_clone | Y48G9A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026800 | ||||||||
| WBPaper00027365 | |||||||||
| WBPaper00029292 | |||||||||
| WBPaper00033126 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00054451 | |||||||||
| WBPaper00062388 | |||||||||
| WBPaper00064071 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
