WormBase Tree Display for Gene: WBGene00019644
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WBGene00019644 | SMap | S_parent | Sequence | K11D12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | cpt-4 | Person_evidence | WBPerson3206 | |||||
WBPerson3205 | |||||||||
Sequence_name | K11D12.4 | ||||||||
Molecular_name | K11D12.4 | ||||||||
K11D12.4.1 | |||||||||
CE12132 | |||||||||
Other_name | CELE_K11D12.4 | Accession_evidence | NDB | BX284605 | |||||
Public_name | cpt-4 | ||||||||
DB_info | Database | AceView | gene | 5F502 | |||||
WormQTL | gene | WBGene00019644 | |||||||
WormFlux | gene | WBGene00019644 | |||||||
NDB | locus_tag | CELE_K11D12.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00019644|UniProtKB=O44619 | |||||||
family | PTHR22589 | ||||||||
NCBI | gene | 178889 | |||||||
RefSeq | protein | NM_071947.5 | |||||||
TrEMBL | UniProtAcc | O44619 | |||||||
UniProt_GCRP | UniProtAcc | O44619 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 18 Jul 2005 13:34:00 | WBPerson2970 | Name_change | CGC_name | cpt-4 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | cpt | ||||||||
Allele (196) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (6) | |||||||||
Ortholog (39) | |||||||||
Paralog | WBGene00000481 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00007175 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00008629 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00009622 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00011122 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00011850 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00012907 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00021703 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00020911 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00021002 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to enable carnitine O-palmitoyltransferase activity. Predicted to be involved in carnitine metabolic process and fatty acid metabolic process. Predicted to be located in mitochondrion. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | K11D12.4 | |||||||
Corresponding_transcript | K11D12.4.1 | ||||||||
Other_sequence | JI170814.1 | ||||||||
CSC02204_1 | |||||||||
JI482264.1 | |||||||||
JI473788.1 | |||||||||
FD514214.1 | |||||||||
Dviv_isotig19746 | |||||||||
Associated_feature | WBsf652601 | ||||||||
WBsf668933 | |||||||||
WBsf668934 | |||||||||
WBsf999918 | |||||||||
WBsf999919 | |||||||||
WBsf1019580 | |||||||||
WBsf1019581 | |||||||||
WBsf233631 | |||||||||
Experimental_info | RNAi_result | WBRNAi00050589 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1026745 | ||||||||
Expr1038482 | |||||||||
Expr1154296 | |||||||||
Expr2010517 | |||||||||
Expr2028757 | |||||||||
Drives_construct | WBCnstr00025706 | ||||||||
Construct_product | WBCnstr00025706 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (308) | |||||||||
Interaction | WBInteraction000437840 | ||||||||
WBInteraction000503222 | |||||||||
WBInteraction000504131 | |||||||||
WBInteraction000578748 | |||||||||
Map_info | Map | V | Position | -3.58473 | Error | 0.002569 | |||
Positive | Positive_clone | K11D12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00026800 | ||||||||
WBPaper00029292 | |||||||||
WBPaper00042257 | |||||||||
WBPaper00054451 | |||||||||
WBPaper00062388 | |||||||||
WBPaper00062948 | |||||||||
WBPaper00064634 | |||||||||
WBPaper00065727 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |