WormBase Tree Display for Gene: WBGene00001157
expand all nodes | collapse all nodes | view schema
| WBGene00001157 | Evidence | Person_evidence | WBPerson3205 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Author_evidence | Van Gilst M | ||||||||
| SMap | S_parent | Sequence | F01G10 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | ech-8 | |||||||
| Sequence_name | F01G10.2 | ||||||||
| Molecular_name | F01G10.2 | ||||||||
| F01G10.2.1 | |||||||||
| CE35450 | |||||||||
| Other_name | CELE_F01G10.2 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | ech-8 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:23 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ech | ||||||||
| Allele (36) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00030657 | ||||||||
| 00030658 | |||||||||
| 00030659 | |||||||||
| 00108335 | |||||||||
| 00108336 | |||||||||
| 00108337 | |||||||||
| 00108338 | |||||||||
| Ortholog (31) | |||||||||
| Paralog | WBGene00001158 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00001150 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00007129 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00010035 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00019978 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00020347 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00022130 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable 3-hydroxyacyl-CoA dehydrogenase activity. Predicted to be involved in fatty acid beta-oxidation. Predicted to be located in peroxisome. Human ortholog(s) of this gene implicated in Fanconi renotubular syndrome 3. Is an ortholog of human EHHADH (enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080759 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3247) | ||||
| Molecular_info | Corresponding_CDS | F01G10.2 | |||||||
| Corresponding_CDS_history | F01G10.2:wp109 | ||||||||
| Corresponding_transcript | F01G10.2.1 | ||||||||
| Other_sequence (11) | |||||||||
| Associated_feature | WBsf652117 | ||||||||
| WBsf008734 | |||||||||
| WBsf230704 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00102619 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00081474 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043764 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00081472 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012744 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030548 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1029037 | ||||||||
| Expr1030736 | |||||||||
| Expr1147742 | |||||||||
| Expr2011172 | |||||||||
| Expr2029408 | |||||||||
| Drives_construct | WBCnstr00037059 | ||||||||
| Construct_product | WBCnstr00037059 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (171) | |||||||||
| Interaction (52) | |||||||||
| Map_info | Map | IV | Position | 4.56287 | |||||
| Positive | Positive_clone | F01G10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026800 | ||||||||
| WBPaper00029292 | |||||||||
| WBPaper00033126 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00062388 | |||||||||
| WBPaper00065140 | |||||||||
| WBPaper00065877 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
