WormBase Tree Display for Gene: WBGene00007129
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| WBGene00007129 | SMap | S_parent | Sequence | B0272 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | B0272.3 | |||||||
| Molecular_name | B0272.3 | ||||||||
| B0272.3.1 | |||||||||
| CE00852 | |||||||||
| Other_name | CELE_B0272.3 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | B0272.3 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:47 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (25) | |||||||||
| Strain | WBStrain00003159 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Ortholog (33) | |||||||||
| Paralog | WBGene00010035 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00019978 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00001150 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00001157 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00001158 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00020347 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00022130 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | B0272.3 encodes a 3-hydroxyacyl-CoA dehydrogenase; by homology, the product of B0272.3 is predicted to function in mitochondrial fatty acid metabolism by catalyzing the NAD+-dependent oxidation of short-chain hydroxyacyl CoAs; large-scale expression studies indicate that B0272.3 is widely expressed. | Paper_evidence | WBPaper00031006 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 11 Nov 2008 00:00:00 | ||||||||
| Automated_description | Predicted to enable 3-hydroxyacyl-CoA dehydrogenase activity. Predicted to be involved in fatty acid beta-oxidation. Predicted to be located in mitochondrion. Expressed widely. Human ortholog(s) of this gene implicated in familial hyperinsulinemic hypoglycemia 4. Is an ortholog of human HADH (hydroxyacyl-CoA dehydrogenase). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0070215 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4799) | ||||
| Molecular_info | Corresponding_CDS | B0272.3 | |||||||
| Corresponding_transcript | B0272.3.1 | ||||||||
| Other_sequence (102) | |||||||||
| Associated_feature | WBsf648410 | ||||||||
| WBsf1006429 | |||||||||
| WBsf1023558 | |||||||||
| WBsf236161 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00102622 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00038826 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009645 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028042 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00090695 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram2006 | ||||||||
| Expr70 | |||||||||
| Expr5032 | |||||||||
| Expr1012851 | |||||||||
| Expr1033066 | |||||||||
| Expr1143029 | |||||||||
| Expr2000105 | |||||||||
| Expr2018321 | |||||||||
| Drives_construct | WBCnstr00003637 | ||||||||
| WBCnstr00033976 | |||||||||
| Construct_product | WBCnstr00033976 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (140) | |||||||||
| Interaction (13) | |||||||||
| Map_info | Positive | Positive_clone | B0272 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 1.20398 | |||||||
| Reference | WBPaper00026800 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
