WormBase Tree Display for Gene: WBGene00021430
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| WBGene00021430 | SMap | S_parent | Sequence | Y38F2AR | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | Y38F2AR.12 | |||||||
| Molecular_name | Y38F2AR.12a | ||||||||
| Y38F2AR.12a.1 | |||||||||
| CE48219 | |||||||||
| Y38F2AR.12b | |||||||||
| CE33863 | |||||||||
| Y38F2AR.12c | |||||||||
| CE49079 | |||||||||
| Y38F2AR.12b.1 | |||||||||
| Y38F2AR.12c.1 | |||||||||
| Other_name | CELE_Y38F2AR.12 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | Y38F2AR.12 | ||||||||
| DB_info | Database | AceView | gene | 4D172 | |||||
| WormQTL | gene | WBGene00021430 | |||||||
| WormFlux | gene | WBGene00021430 | |||||||
| NDB | locus_tag | CELE_Y38F2AR.12 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021430|UniProtKB=A0A9S2 | |||||||
| family | PTHR11365 | ||||||||
| NCBI | gene | 189679 | |||||||
| RefSeq | protein | NM_001083256.4 | |||||||
| NM_001307601.3 | |||||||||
| NM_001392265.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF300520 | |||||||
| TrEMBL | UniProtAcc | U4PMK1 | |||||||
| A0A9S2 | |||||||||
| Q86FM9 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A9S2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 07 Jun 2006 09:47:38 | WBPerson1849 | Event | Acquires_merge | WBGene00021429 | ||||
| Acquires_merge | WBGene00021429 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (253) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00004208 | ||||||||
| 00004209 | |||||||||
| 00125796 | |||||||||
| 00125797 | |||||||||
| Ortholog (51) | |||||||||
| Structured_description | Automated_description | Predicted to enable 5-oxoprolinase (ATP-hydrolyzing) activity. Predicted to be involved in glutathione metabolic process. Is an ortholog of human OPLAH (5-oxoprolinase, ATP-hydrolysing). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y38F2AR.12a | |||||||
| Y38F2AR.12b | |||||||||
| Y38F2AR.12c | |||||||||
| Corresponding_CDS_history | Y38F2AR.12:wp160 | ||||||||
| Y38F2AR.12a:wp237 | |||||||||
| Corresponding_transcript | Y38F2AR.12a.1 | ||||||||
| Y38F2AR.12b.1 | |||||||||
| Y38F2AR.12c.1 | |||||||||
| Other_sequence (40) | |||||||||
| Associated_feature (12) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00020300 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056048 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020308 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1029107 | ||||||||
| Expr1039362 | |||||||||
| Expr1159572 | |||||||||
| Expr2007315 | |||||||||
| Expr2025550 | |||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (154) | |||||||||
| Interaction | WBInteraction000139835 | ||||||||
| WBInteraction000565249 | |||||||||
| WBInteraction000578727 | |||||||||
| WBInteraction000584977 | |||||||||
| Map_info | Positive | Positive_clone | Y38F2AR | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | -7.51834 | |||||||
| Reference | WBPaper00010022 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
