WormBase Tree Display for Gene: WBGene00021325

WBGene00021325 SMap: S_parent: Sequence: Y34B4A
  Identity: Version: 2
    Name: CGC_name: nspg-13 Person_evidence: WBPerson18244
      Sequence_name: Y34B4A.9
      Molecular_name: Y34B4A.9
        Y34B4A.9.1
        CE27401
      Other_name: CELE_Y34B4A.9 Accession_evidence: NDB BX284606
      Public_name: nspg-13
    DB_info: Database: AceView gene XF875
        WormQTL gene WBGene00021325
        WormFlux gene WBGene00021325
        NDB locus_tag CELE_Y34B4A.9
        Panther gene CAEEL|WormBase=WBGene00021325|UniProtKB=Q95Y28
          family PTHR34311
        NCBI gene 180796
        RefSeq protein NM_076490.7
        TREEFAM TREEFAM_ID TF315792
        TrEMBL UniProtAcc Q95Y28
        UniProt_GCRP UniProtAcc Q95Y28
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:04 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 08 Jul 2021 14:36:59 WBPerson1983 Name_change: CGC_name: nspg-13
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nspg
    Allele (25)
    RNASeq_FPKM (74)
    Contained_in_operon: CEOPX056
    Ortholog (24)
    Paralog: WBGene00009883 Caenorhabditis elegans From_analysis: Panther
      WBGene00010793 Caenorhabditis elegans From_analysis: Panther
      WBGene00011592 Caenorhabditis elegans From_analysis: Panther
      WBGene00011856 Caenorhabditis elegans From_analysis: Panther
      WBGene00017591 Caenorhabditis elegans From_analysis: Panther
      WBGene00018951 Caenorhabditis elegans From_analysis: Panther
      WBGene00021322 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00022490 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00021805 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Automated_description: Enriched in AFD; head mesodermal cell; intestine; and pharyngeal muscle cell based on tiling array; RNA-seq; and proteomic studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; proteomic; and RNA-seq studies. Is affected by fifteen chemicals including methylmercuric chloride; Zidovudine; and Psoralens based on microarray and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y34B4A.9
    Corresponding_transcript: Y34B4A.9.1
    Other_sequence (25)
    Associated_feature: WBsf662769
      WBsf662770
      WBsf235697
  Experimental_info: RNAi_result: WBRNAi00055825 Inferred_automatically: RNAi_primary
      WBRNAi00033631 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1025660
      Expr1039301
      Expr1159353
      Expr2007220
      Expr2025452
    Drives_construct: WBCnstr00024579
    Construct_product: WBCnstr00024579
    Microarray_results (18)
    Expression_cluster (235)
    SAGE_tag: SAGE:gctgtgggtc Strand: Antisense
      SAGE:tctgcggtcc Strand: Sense
        Unambiguously_mapped
      SAGE:gcatcgtttg Strand: Antisense
      SAGE:ttctgggctt Strand: Sense
        Unambiguously_mapped
      SAGE:ggctctgaat Strand: Sense
        Unambiguously_mapped
      SAGE:ttctgggcttgtgaata Strand: Sense
        Unambiguously_mapped
    Interaction: WBInteraction000561811
      WBInteraction000562846
      WBInteraction000569368
      WBInteraction000572287
      WBInteraction000586356
  Map_info: Positive: Positive_clone: Y34B4A Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: X -5.92198
  Reference: WBPaper00041771
    WBPaper00058665
  Method: Gene