WormBase Tree Display for Gene: WBGene00022490
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WBGene00022490 | SMap | S_parent | Sequence | Y119D3B | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | nspg-8 | Person_evidence | WBPerson18244 | |||||
Sequence_name | Y119D3B.13 | ||||||||
Molecular_name | Y119D3B.13 | ||||||||
Y119D3B.13.1 | |||||||||
CE27241 | |||||||||
Other_name | CELE_Y119D3B.13 | Accession_evidence | NDB | BX284603 | |||||
Public_name | nspg-8 | ||||||||
DB_info | Database | AceView | gene | 3C273 | |||||
WormQTL | gene | WBGene00022490 | |||||||
WormFlux | gene | WBGene00022490 | |||||||
NDB | locus_tag | CELE_Y119D3B.13 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00022490|UniProtKB=Q95Y74 | |||||||
family | PTHR34311 | ||||||||
NCBI | gene | 175283 | |||||||
RefSeq | protein | NM_064943.7 | |||||||
TREEFAM | TREEFAM_ID | TF315792 | |||||||
TrEMBL | UniProtAcc | Q95Y74 | |||||||
UniProt_GCRP | UniProtAcc | Q95Y74 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 10 Jul 2021 01:06:38 | WBPerson1983 | Name_change | CGC_name | nspg-8 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nspg | ||||||||
Allele (76) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (19) | |||||||||
Paralog | WBGene00009883 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WBGene00010793 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WBGene00011592 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00011856 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00017591 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WBGene00018951 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00021321 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00021322 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00021325 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00021805 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
Structured_description | Automated_description | Enriched in intestine based on tiling array and RNA-seq studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray; RNA-seq; and proteomic studies. Is affected by fourteen chemicals including Ethanol; methylmercuric chloride; and rotenone based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y119D3B.13 | |||||||
Corresponding_transcript | Y119D3B.13.1 | ||||||||
Other_sequence | CSC02114_1 | ||||||||
CR08294 | |||||||||
CRC10693_1 | |||||||||
FD514530.1 | |||||||||
Associated_feature | WBsf224438 | ||||||||
Experimental_info | RNAi_result | WBRNAi00020002 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00002310 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00055508 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1021671 | ||||||||
Expr1159012 | |||||||||
Expr2007077 | |||||||||
Expr2025305 | |||||||||
Microarray_results (18) | |||||||||
Expression_cluster (186) | |||||||||
Map_info | Map | III | Position | -22.6371 | |||||
Positive | Positive_clone | Y119D3B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00065331 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |