WormBase Tree Display for Gene: WBGene00022490
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WBGene00022490 | SMap | S_parent | Sequence | Y119D3B | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | nspg-8 | Person_evidence | WBPerson18244 | |||
Sequence_name | Y119D3B.13 | ||||||
Molecular_name | Y119D3B.13 | ||||||
Y119D3B.13.1 | |||||||
CE27241 | |||||||
Other_name | CELE_Y119D3B.13 | Accession_evidence | NDB | BX284603 | |||
Public_name | nspg-8 | ||||||
DB_info | Database | AceView | gene | 3C273 | |||
WormQTL | gene | WBGene00022490 | |||||
WormFlux | gene | WBGene00022490 | |||||
NDB | locus_tag | CELE_Y119D3B.13 | |||||
Panther | gene | CAEEL|WormBase=WBGene00022490|UniProtKB=Q95Y74 | |||||
family | PTHR34311 | ||||||
NCBI | gene | 175283 | |||||
RefSeq | protein | NM_064943.7 | |||||
TREEFAM | TREEFAM_ID | TF315792 | |||||
TrEMBL | UniProtAcc | Q95Y74 | |||||
UniProt_GCRP | UniProtAcc | Q95Y74 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | nspg | ||||||
Allele (76) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (19) | |||||||
Paralog | WBGene00009883 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | |||||||
WBGene00010793 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WBGene00011592 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00011856 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00017591 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WBGene00018951 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00021321 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
WBGene00021322 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00021325 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00021805 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
Structured_description | Automated_description | Enriched in intestine based on tiling array and RNA-seq studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray; RNA-seq; and proteomic studies. Is affected by fourteen chemicals including Ethanol; methylmercuric chloride; and rotenone based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y119D3B.13 | |||||
Corresponding_transcript | Y119D3B.13.1 | ||||||
Other_sequence | CSC02114_1 | ||||||
CR08294 | |||||||
CRC10693_1 | |||||||
FD514530.1 | |||||||
Associated_feature | WBsf224438 | ||||||
Experimental_info | RNAi_result | WBRNAi00020002 | Inferred_automatically | RNAi_primary | |||
WBRNAi00002310 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00055508 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1021671 | ||||||
Expr1159012 | |||||||
Expr2007077 | |||||||
Expr2025305 | |||||||
Microarray_results (18) | |||||||
Expression_cluster (186) | |||||||
Map_info | Map | III | Position | -22.6371 | |||
Positive | Positive_clone | Y119D3B | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00065331 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |