WormBase Tree Display for Gene: WBGene00011856
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| WBGene00011856 | SMap | S_parent | Sequence | T20D3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nspg-7.1 | Person_evidence | WBPerson18244 | |||||
| Sequence_name | T20D3.2 | ||||||||
| Molecular_name | T20D3.2 | ||||||||
| T20D3.2.1 | |||||||||
| CE03671 | |||||||||
| Other_name | CELE_T20D3.2 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | nspg-7.1 | ||||||||
| DB_info | Database | AceView | gene | 4K94 | |||||
| WormQTL | gene | WBGene00011856 | |||||||
| WormFlux | gene | WBGene00011856 | |||||||
| NDB | locus_tag | CELE_T20D3.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011856|UniProtKB=O01254 | |||||||
| family | PTHR34311 | ||||||||
| NCBI | gene | 177760 | |||||||
| RefSeq | protein | NM_069239.7 | |||||||
| TREEFAM | TREEFAM_ID | TF315792 | |||||||
| TrEMBL | UniProtAcc | O01254 | |||||||
| UniProt_GCRP | UniProtAcc | O01254 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 10 Jul 2021 01:03:33 | WBPerson1983 | Name_change | CGC_name | nspg-7.1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nspg | ||||||||
| Allele (21) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (26) | |||||||||
| Paralog | WBGene00009883 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00010793 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00011592 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00018951 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00021321 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00021325 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00022490 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00021322 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00017591 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00021805 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in germ line; head mesodermal cell; intestine; mechanosensory neurons; and pharyngeal muscle cell based on proteomic; tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and proteomic studies. Is affected by twenty-one chemicals including rotenone; mianserin; and D-glucose based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T20D3.2 | |||||||
| Corresponding_transcript | T20D3.2.1 | ||||||||
| Other_sequence (14) | |||||||||
| Associated_feature | WBsf230552 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00053612 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1012787 | ||||||||
| Expr1035222 | |||||||||
| Expr1157170 | |||||||||
| Expr2006284 | |||||||||
| Expr2024501 | |||||||||
| Drives_construct | WBCnstr00030332 | ||||||||
| Construct_product | WBCnstr00030332 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (219) | |||||||||
| Interaction (60) | |||||||||
| Map_info | Positive | Positive_clone | T20D3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 4.18007 | |||||||
| Reference | WBPaper00058665 | ||||||||
| Method | Gene |
