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WormBase Tree Display for Gene: WBGene00011856

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Name Class

WBGene00011856SMapS_parentSequenceT20D3
IdentityVersion2
NameCGC_namenspg-7.1Person_evidenceWBPerson18244
Sequence_nameT20D3.2
Molecular_nameT20D3.2
T20D3.2.1
CE03671
Other_nameCELE_T20D3.2Accession_evidenceNDBBX284604
Public_namenspg-7.1
DB_infoDatabaseAceViewgene4K94
WormQTLgeneWBGene00011856
WormFluxgeneWBGene00011856
NDBlocus_tagCELE_T20D3.2
PanthergeneCAEEL|WormBase=WBGene00011856|UniProtKB=O01254
familyPTHR34311
NCBIgene177760
RefSeqproteinNM_069239.7
TREEFAMTREEFAM_IDTF315792
TrEMBLUniProtAccO01254
UniProt_GCRPUniProtAccO01254
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:53WBPerson1971EventImportedInitial conversion from CDS class of WS125
210 Jul 2021 01:03:33WBPerson1983Name_changeCGC_namenspg-7.1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnspg
Allele (21)
RNASeq_FPKM (74)
Ortholog (26)
ParalogWBGene00009883Caenorhabditis elegansFrom_analysisPanther
WBGene00010793Caenorhabditis elegansFrom_analysisPanther
WBGene00011592Caenorhabditis elegansFrom_analysisPanther
WBGene00018951Caenorhabditis elegansFrom_analysisPanther
WBGene00021321Caenorhabditis elegansFrom_analysisTreeFam
WBGene00021325Caenorhabditis elegansFrom_analysisPanther
WBGene00022490Caenorhabditis elegansFrom_analysisPanther
WBGene00021322Caenorhabditis elegansFrom_analysisPanther
WBGene00017591Caenorhabditis elegansFrom_analysisPanther
WBGene00021805Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in germ line; head mesodermal cell; intestine; mechanosensory neurons; and pharyngeal muscle cell based on proteomic; tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and proteomic studies. Is affected by twenty-one chemicals including rotenone; mianserin; and D-glucose based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST20D3.2
Corresponding_transcriptT20D3.2.1
Other_sequence (14)
Associated_featureWBsf230552
Experimental_infoRNAi_resultWBRNAi00053612Inferred_automaticallyRNAi_primary
Expr_patternExpr1012787
Expr1035222
Expr1157170
Expr2006284
Expr2024501
Drives_constructWBCnstr00030332
Construct_productWBCnstr00030332
Microarray_results (20)
Expression_cluster (219)
InteractionWBInteraction000195246
WBInteraction000206989
WBInteraction000208493
WBInteraction000237242
WBInteraction000250151
WBInteraction000252000
WBInteraction000259091
WBInteraction000262961
WBInteraction000268671
WBInteraction000273256
WBInteraction000277345
WBInteraction000279448
WBInteraction000285227
WBInteraction000285976
WBInteraction000290323
WBInteraction000294982
WBInteraction000308008
WBInteraction000310848
WBInteraction000313822
WBInteraction000317850
WBInteraction000319891
WBInteraction000319991
WBInteraction000321633
WBInteraction000331808
WBInteraction000335899
WBInteraction000336269
WBInteraction000342930
WBInteraction000343633
WBInteraction000347690
WBInteraction000349704
WBInteraction000350540
WBInteraction000354916
WBInteraction000356130
WBInteraction000358500
WBInteraction000358597
WBInteraction000363897
WBInteraction000363973
WBInteraction000370509
WBInteraction000378433
WBInteraction000380715
WBInteraction000395425
WBInteraction000395985
WBInteraction000396452
WBInteraction000400832
WBInteraction000408432
WBInteraction000409382
WBInteraction000415196
WBInteraction000419421
WBInteraction000419795
WBInteraction000422298
WBInteraction000425315
WBInteraction000437495
WBInteraction000438954
WBInteraction000440343
WBInteraction000445816
WBInteraction000447348
WBInteraction000451687
WBInteraction000454909
WBInteraction000460687
WBInteraction000553072
Map_infoPositivePositive_cloneT20D3Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV4.18007
ReferenceWBPaper00058665
MethodGene