WormBase Tree Display for Gene: WBGene00018951
expand all nodes | collapse all nodes | view schema
WBGene00018951 | SMap | S_parent | Sequence | F56C9 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | nspg-6 | Person_evidence | WBPerson18244 | |||||
Sequence_name | F56C9.7 | ||||||||
Molecular_name | F56C9.7 | ||||||||
F56C9.7.1 | |||||||||
CE01326 | |||||||||
Other_name | CELE_F56C9.7 | Accession_evidence | NDB | BX284603 | |||||
Public_name | nspg-6 | ||||||||
DB_info | Database | AceView | gene | 3I404 | |||||
WormQTL | gene | WBGene00018951 | |||||||
WormFlux | gene | WBGene00018951 | |||||||
NDB | locus_tag | CELE_F56C9.7 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00018951|UniProtKB=Q20865 | |||||||
family | PTHR34311 | ||||||||
NCBI | gene | 176037 | |||||||
RefSeq | protein | NM_066211.6 | |||||||
TREEFAM | TREEFAM_ID | TF315792 | |||||||
TrEMBL | UniProtAcc | Q20865 | |||||||
UniProt_GCRP | UniProtAcc | Q20865 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 10 Jul 2021 01:02:00 | WBPerson1983 | Name_change | CGC_name | nspg-6 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nspg | ||||||||
Allele (23) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00069405 | ||||||||
00069406 | |||||||||
Ortholog (25) | |||||||||
Paralog | WBGene00009883 | Caenorhabditis elegans | From_analysis | Panther | |||||
WBGene00010793 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00011592 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00011856 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00017591 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00021321 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00022490 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00021322 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00021805 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00021325 | Caenorhabditis elegans | From_analysis | Panther | ||||||
Structured_description | Concise_description | F56C9.7 encodes a protein containing a DUF1261 (Domain of unknown function 1261) domain that is conserved amongst nematodes; loss of F56C9.7 activity results in decreased intestinal dipeptide transport and slightly increased fat storage; loss of F56C9.7 activity in a bar-1 mutant background also results in developmental variation; large-scale expression studies indicate that F56C9.7 is expressed in the intestine. | Paper_evidence | WBPaper00040287 | |||||
WBPaper00031006 | |||||||||
WBPaper00031036 | |||||||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 21 Oct 2011 00:00:00 | ||||||||
Automated_description | Involved in regulation of lipid storage and regulation of peptide transport. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F56C9.7 | |||||||
Corresponding_transcript | F56C9.7.1 | ||||||||
Other_sequence (11) | |||||||||
Associated_feature | WBsf651195 | ||||||||
WBsf226957 | |||||||||
Experimental_info | RNAi_result | WBRNAi00090615 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00002031 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00032950 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00048678 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00005522 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00067176 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00015804 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr6217 | ||||||||
Expr1028347 | |||||||||
Expr1038174 | |||||||||
Expr1152437 | |||||||||
Expr2004288 | |||||||||
Expr2022512 | |||||||||
Drives_construct | WBCnstr00002954 | ||||||||
WBCnstr00026169 | |||||||||
Construct_product | WBCnstr00026169 | ||||||||
Microarray_results (21) | |||||||||
Expression_cluster (228) | |||||||||
Interaction (45) | |||||||||
Map_info | Positive | Positive_clone | F56C9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | III | -0.753729 | |||||||
Reference | WBPaper00040287 | ||||||||
WBPaper00058665 | |||||||||
Method | Gene |