WormBase Tree Display for Gene: WBGene00021322
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WBGene00021322 | SMap | S_parent | Sequence | Y34B4A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | nspg-14 | Person_evidence | WBPerson18244 | |||||
Sequence_name | Y34B4A.6 | ||||||||
Molecular_name | Y34B4A.6 | ||||||||
Y34B4A.6.1 | |||||||||
CE30215 | |||||||||
Other_name | CELE_Y34B4A.6 | Accession_evidence | NDB | BX284606 | |||||
Public_name | nspg-14 | ||||||||
DB_info | Database | AceView | gene | XF873 | |||||
WormQTL | gene | WBGene00021322 | |||||||
WormFlux | gene | WBGene00021322 | |||||||
NDB | locus_tag | CELE_Y34B4A.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00021322|UniProtKB=Q95Y29 | |||||||
family | PTHR34311 | ||||||||
NCBI | gene | 180795 | |||||||
RefSeq | protein | NM_076489.9 | |||||||
TREEFAM | TREEFAM_ID | TF315792 | |||||||
TrEMBL | UniProtAcc | Q95Y29 | |||||||
UniProt_GCRP | UniProtAcc | Q95Y29 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 08 Jul 2021 14:39:31 | WBPerson1983 | Name_change | CGC_name | nspg-14 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nspg | ||||||||
Allele (37) | |||||||||
RNASeq_FPKM (74) | |||||||||
Contained_in_operon | CEOPX056 | ||||||||
Ortholog (22) | |||||||||
Paralog | WBGene00009883 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WBGene00010793 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WBGene00011592 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00011856 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00017591 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WBGene00018951 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00021321 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00021325 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00022490 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00021805 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
Structured_description | Automated_description | Enriched in germ line; head mesodermal cell; intestine; mechanosensory neurons; and pharyngeal muscle cell based on proteomic; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and proteomic studies. Is affected by twelve chemicals including methylmercuric chloride; rotenone; and D-glucopyranose based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y34B4A.6 | |||||||
Corresponding_transcript | Y34B4A.6.1 | ||||||||
Other_sequence (11) | |||||||||
Associated_feature | WBsf648091 | ||||||||
WBsf662768 | |||||||||
WBsf1005217 | |||||||||
WBsf1022928 | |||||||||
WBsf235696 | |||||||||
Experimental_info | RNAi_result | WBRNAi00055821 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1016893 | ||||||||
Expr1039298 | |||||||||
Expr1159350 | |||||||||
Expr2007217 | |||||||||
Expr2025449 | |||||||||
Microarray_results (15) | |||||||||
Expression_cluster (195) | |||||||||
Interaction (16) | |||||||||
Map_info | Positive | Positive_clone | Y34B4A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | X | -5.92657 | |||||||
Reference | WBPaper00053423 | ||||||||
WBPaper00057037 | |||||||||
WBPaper00058665 | |||||||||
Method | Gene |