WormBase Tree Display for Gene: WBGene00021322
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| WBGene00021322 | SMap | S_parent | Sequence | Y34B4A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nspg-14 | Person_evidence | WBPerson18244 | |||||
| Sequence_name | Y34B4A.6 | ||||||||
| Molecular_name | Y34B4A.6 | ||||||||
| Y34B4A.6.1 | |||||||||
| CE30215 | |||||||||
| Other_name | CELE_Y34B4A.6 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | nspg-14 | ||||||||
| DB_info | Database | AceView | gene | XF873 | |||||
| WormQTL | gene | WBGene00021322 | |||||||
| WormFlux | gene | WBGene00021322 | |||||||
| NDB | locus_tag | CELE_Y34B4A.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021322|UniProtKB=Q95Y29 | |||||||
| family | PTHR34311 | ||||||||
| NCBI | gene | 180795 | |||||||
| RefSeq | protein | NM_076489.9 | |||||||
| TREEFAM | TREEFAM_ID | TF315792 | |||||||
| TrEMBL | UniProtAcc | Q95Y29 | |||||||
| UniProt_GCRP | UniProtAcc | Q95Y29 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 08 Jul 2021 14:39:31 | WBPerson1983 | Name_change | CGC_name | nspg-14 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nspg | ||||||||
| Allele | WBVar01146131 | ||||||||
| WBVar01146132 | |||||||||
| WBVar01945358 | |||||||||
| WBVar01146133 | |||||||||
| WBVar01146134 | |||||||||
| WBVar01146135 | |||||||||
| WBVar01146136 | |||||||||
| WBVar01146137 | |||||||||
| WBVar01146138 | |||||||||
| WBVar01146139 | |||||||||
| WBVar01146140 | |||||||||
| WBVar01146141 | |||||||||
| WBVar01146142 | |||||||||
| WBVar01146143 | |||||||||
| WBVar01146144 | |||||||||
| WBVar01549730 | |||||||||
| WBVar01549731 | |||||||||
| WBVar01549732 | |||||||||
| WBVar01549733 | |||||||||
| WBVar01549734 | |||||||||
| WBVar01549735 | |||||||||
| WBVar01549736 | |||||||||
| WBVar01601740 | |||||||||
| WBVar01499624 | |||||||||
| WBVar00503325 | |||||||||
| WBVar00503326 | |||||||||
| WBVar00503327 | |||||||||
| WBVar00503328 | |||||||||
| WBVar00503329 | |||||||||
| WBVar00503330 | |||||||||
| WBVar00503331 | |||||||||
| WBVar00503332 | |||||||||
| WBVar00503333 | |||||||||
| WBVar01879047 | |||||||||
| WBVar01879048 | |||||||||
| WBVar01879049 | |||||||||
| WBVar01500067 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOPX056 | ||||||||
| Ortholog (22) | |||||||||
| Paralog | WBGene00009883 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WBGene00010793 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00011592 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00011856 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00017591 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00018951 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00021321 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00021325 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00022490 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021805 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| Structured_description | Automated_description | Enriched in germ line; head mesodermal cell; intestine; mechanosensory neurons; and pharyngeal muscle cell based on proteomic; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and proteomic studies. Is affected by twelve chemicals including methylmercuric chloride; rotenone; and D-glucopyranose based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y34B4A.6 | |||||||
| Corresponding_transcript | Y34B4A.6.1 | ||||||||
| Other_sequence (11) | |||||||||
| Associated_feature | WBsf648091 | ||||||||
| WBsf662768 | |||||||||
| WBsf1005217 | |||||||||
| WBsf1022928 | |||||||||
| WBsf235696 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00055821 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1016893 | ||||||||
| Expr1039298 | |||||||||
| Expr1159350 | |||||||||
| Expr2007217 | |||||||||
| Expr2025449 | |||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (195) | |||||||||
| Interaction (16) | |||||||||
| Map_info | Positive | Positive_clone | Y34B4A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -5.92657 | |||||||
| Reference | WBPaper00053423 | ||||||||
| WBPaper00057037 | |||||||||
| WBPaper00058665 | |||||||||
| Method | Gene |
