WormBase Tree Display for Gene: WBGene00021322

WBGene00021322 SMap: S_parent: Sequence: Y34B4A
  Identity: Version: 2
    Name: CGC_name: nspg-14 Person_evidence: WBPerson18244
      Sequence_name: Y34B4A.6
      Molecular_name: Y34B4A.6
        Y34B4A.6.1
        CE30215
      Other_name: CELE_Y34B4A.6 Accession_evidence: NDB BX284606
      Public_name: nspg-14
    DB_info: Database: AceView gene XF873
        WormQTL gene WBGene00021322
        WormFlux gene WBGene00021322
        NDB locus_tag CELE_Y34B4A.6
        Panther gene CAEEL|WormBase=WBGene00021322|UniProtKB=Q95Y29
          family PTHR34311
        NCBI gene 180795
        RefSeq protein NM_076489.9
        TREEFAM TREEFAM_ID TF315792
        TrEMBL UniProtAcc Q95Y29
        UniProt_GCRP UniProtAcc Q95Y29
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:04 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 08 Jul 2021 14:39:31 WBPerson1983 Name_change: CGC_name: nspg-14
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nspg
    Allele (37)
    RNASeq_FPKM (74)
    Contained_in_operon: CEOPX056
    Ortholog: WBGene00035072 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            Inparanoid_8
            WormBase-Compara
      WBGene00051711 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00145313 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      CSP21.g15448 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g16906 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g10510 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g2477 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g9039 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g15850 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g10907 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g21612 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g17694 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00116.g4785 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-Y34B4A.6 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold527.g3112 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00012.g815 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_00538 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_024390 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g07110 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g9219 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0242100 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g19044 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00009883 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00010793 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00011592 Caenorhabditis elegans From_analysis: Panther
      WBGene00011856 Caenorhabditis elegans From_analysis: Panther
      WBGene00017591 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00018951 Caenorhabditis elegans From_analysis: Panther
      WBGene00021321 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00021325 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00022490 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00021805 Caenorhabditis elegans From_analysis: TreeFam
            Panther
    Structured_description: Automated_description: Enriched in germ line; head mesodermal cell; intestine; mechanosensory neurons; and pharyngeal muscle cell based on proteomic; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and proteomic studies. Is affected by twelve chemicals including methylmercuric chloride; rotenone; and D-glucopyranose based on microarray and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y34B4A.6
    Corresponding_transcript: Y34B4A.6.1
    Other_sequence (11)
    Associated_feature: WBsf648091
      WBsf662768
      WBsf1005217
      WBsf1022928
      WBsf235696
  Experimental_info: RNAi_result: WBRNAi00055821 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1016893
      Expr1039298
      Expr1159350
      Expr2007217
      Expr2025449
    Microarray_results (15)
    Expression_cluster (195)
    Interaction (16)
  Map_info: Positive: Positive_clone: Y34B4A Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: X -5.92657
  Reference: WBPaper00053423
    WBPaper00057037
    WBPaper00058665
  Method: Gene