WormBase Tree Display for Gene: WBGene00011856
expand all nodes | collapse all nodes | view schema
WBGene00011856 | SMap | S_parent | Sequence | T20D3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | nspg-7.1 | Person_evidence | WBPerson18244 | |||||
Sequence_name | T20D3.2 | ||||||||
Molecular_name | T20D3.2 | ||||||||
T20D3.2.1 | |||||||||
CE03671 | |||||||||
Other_name | CELE_T20D3.2 | Accession_evidence | NDB | BX284604 | |||||
Public_name | nspg-7.1 | ||||||||
DB_info | Database | AceView | gene | 4K94 | |||||
WormQTL | gene | WBGene00011856 | |||||||
WormFlux | gene | WBGene00011856 | |||||||
NDB | locus_tag | CELE_T20D3.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00011856|UniProtKB=O01254 | |||||||
family | PTHR34311 | ||||||||
NCBI | gene | 177760 | |||||||
RefSeq | protein | NM_069239.7 | |||||||
TREEFAM | TREEFAM_ID | TF315792 | |||||||
TrEMBL | UniProtAcc | O01254 | |||||||
UniProt_GCRP | UniProtAcc | O01254 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 10 Jul 2021 01:03:33 | WBPerson1983 | Name_change | CGC_name | nspg-7.1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nspg | ||||||||
Allele (21) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (26) | |||||||||
Paralog | WBGene00009883 | Caenorhabditis elegans | From_analysis | Panther | |||||
WBGene00010793 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00011592 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00018951 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00021321 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00021325 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00022490 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00021322 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00017591 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00021805 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Enriched in germ line; head mesodermal cell; intestine; mechanosensory neurons; and pharyngeal muscle cell based on proteomic; tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and proteomic studies. Is affected by twenty-one chemicals including rotenone; mianserin; and D-glucose based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info (4) | |||||||||
Experimental_info | RNAi_result | WBRNAi00053612 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1012787 | ||||||||
Expr1035222 | |||||||||
Expr1157170 | |||||||||
Expr2006284 | |||||||||
Expr2024501 | |||||||||
Drives_construct | WBCnstr00030332 | ||||||||
Construct_product | WBCnstr00030332 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (219) | |||||||||
Interaction (60) | |||||||||
Map_info | Positive | Positive_clone | T20D3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | IV | 4.18007 | |||||||
Reference | WBPaper00058665 | ||||||||
Method | Gene |