WormBase Tree Display for Gene: WBGene00022490

WBGene00022490 SMap: S_parent: Sequence: Y119D3B
  Identity: Version: 2
    Name: CGC_name: nspg-8 Person_evidence: WBPerson18244
      Sequence_name: Y119D3B.13
      Molecular_name: Y119D3B.13
        Y119D3B.13.1
        CE27241
      Other_name: CELE_Y119D3B.13 Accession_evidence: NDB BX284603
      Public_name: nspg-8
    DB_info: Database: AceView gene 3C273
        WormQTL gene WBGene00022490
        WormFlux gene WBGene00022490
        NDB locus_tag CELE_Y119D3B.13
        Panther gene CAEEL|WormBase=WBGene00022490|UniProtKB=Q95Y74
          family PTHR34311
        NCBI gene 175283
        RefSeq protein NM_064943.7
        TREEFAM TREEFAM_ID TF315792
        TrEMBL UniProtAcc Q95Y74
        UniProt_GCRP UniProtAcc Q95Y74
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:05 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 10 Jul 2021 01:06:38 WBPerson1983 Name_change: CGC_name: nspg-8
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nspg
    Allele: WBVar00389474
      WBVar00802068
      WBVar00389475
      WBVar00802069
      WBVar00802070
      WBVar00389476
      WBVar00802071
      WBVar00802072
      WBVar00802073
      WBVar00802074
      WBVar00802075
      WBVar00802076
      WBVar01565041
      WBVar01500082
      WBVar01565042
      WBVar00802077
      WBVar01565043
      WBVar00802078
      WBVar00802079
      WBVar00802080
      WBVar00802081
      WBVar00802082
      WBVar00802083
      WBVar00802084
      WBVar00017901
      WBVar00802085
      WBVar00802086
      WBVar00802087
      WBVar00802088
      WBVar00017906
      WBVar00802089
      WBVar00802090
      WBVar00802091
      WBVar01479123
      WBVar01499552
      WBVar00096455
      WBVar01498832
      WBVar01951427
      WBVar01836822
      WBVar02120666
      WBVar01700793
      WBVar01700794
      WBVar01700795
      WBVar01700796
      WBVar01700797
      WBVar02014700
      WBVar01792484
      WBVar01917944
      WBVar01792485
      WBVar01769989
      WBVar01402056
      WBVar01769990
      WBVar01769991
      WBVar01402067
      WBVar01707325
      WBVar01707326
      WBVar01707327
      WBVar01707328
      WBVar01707329
      WBVar01707330
      WBVar01273273
      WBVar01491014
      WBVar01323814
      WBVar01323815
      WBVar01323816
      WBVar01323819
      WBVar01323820
      WBVar01256426
      WBVar01323821
      WBVar01323822
      WBVar00036023
      WBVar01415272
      WBVar02012737
      WBVar02148221
      WBVar02012738
      WBVar02012739
    RNASeq_FPKM (74)
    Ortholog (19)
    Paralog: WBGene00009883 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00010793 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00011592 Caenorhabditis elegans From_analysis: Panther
      WBGene00011856 Caenorhabditis elegans From_analysis: Panther
      WBGene00017591 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00018951 Caenorhabditis elegans From_analysis: Panther
      WBGene00021321 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00021322 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00021325 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00021805 Caenorhabditis elegans From_analysis: TreeFam
            Panther
    Structured_description: Automated_description: Enriched in intestine based on tiling array and RNA-seq studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray; RNA-seq; and proteomic studies. Is affected by fourteen chemicals including Ethanol; methylmercuric chloride; and rotenone based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y119D3B.13
    Corresponding_transcript: Y119D3B.13.1
    Other_sequence: CSC02114_1
      CR08294
      CRC10693_1
      FD514530.1
    Associated_feature: WBsf224438
  Experimental_info: RNAi_result: WBRNAi00020002 Inferred_automatically: RNAi_primary
      WBRNAi00002310 Inferred_automatically: RNAi_primary
      WBRNAi00055508 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021671
      Expr1159012
      Expr2007077
      Expr2025305
    Microarray_results (18)
    Expression_cluster (186)
  Map_info: Map: III Position: -22.6371
    Positive: Positive_clone: Y119D3B Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00065331
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene