WormBase Tree Display for Gene: WBGene00022490

WBGene00022490 SMap: S_parent: Sequence: Y119D3B
  Identity: Version: 2
    Name: CGC_name: nspg-8 Person_evidence: WBPerson18244
      Sequence_name: Y119D3B.13
      Molecular_name: Y119D3B.13
        Y119D3B.13.1
        CE27241
      Other_name: CELE_Y119D3B.13 Accession_evidence: NDB BX284603
      Public_name: nspg-8
    DB_info: Database: AceView gene 3C273
        WormQTL gene WBGene00022490
        WormFlux gene WBGene00022490
        NDB locus_tag CELE_Y119D3B.13
        Panther gene CAEEL|WormBase=WBGene00022490|UniProtKB=Q95Y74
          family PTHR34311
        NCBI gene 175283
        RefSeq protein NM_064943.7
        TREEFAM TREEFAM_ID TF315792
        TrEMBL UniProtAcc Q95Y74
        UniProt_GCRP UniProtAcc Q95Y74
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:05 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 10 Jul 2021 01:06:38 WBPerson1983 Name_change: CGC_name: nspg-8
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nspg
    Allele (76)
    RNASeq_FPKM (74)
    Ortholog: WBGene00035471 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00071294 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g4921 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g429 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g12994 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g12880 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g22426 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP32.g10580 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g3306 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP40.g5297 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-Y119D3B.13 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g16769 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00683.g14376 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_14566 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_011056 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g02711 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g9219 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30316300 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g6895 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00009883 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00010793 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00011592 Caenorhabditis elegans From_analysis: Panther
      WBGene00011856 Caenorhabditis elegans From_analysis: Panther
      WBGene00017591 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00018951 Caenorhabditis elegans From_analysis: Panther
      WBGene00021321 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00021322 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00021325 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00021805 Caenorhabditis elegans From_analysis: TreeFam
            Panther
    Structured_description: Automated_description: Enriched in intestine based on tiling array and RNA-seq studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray; RNA-seq; and proteomic studies. Is affected by fourteen chemicals including Ethanol; methylmercuric chloride; and rotenone based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y119D3B.13
    Corresponding_transcript: Y119D3B.13.1
    Other_sequence: CSC02114_1
      CR08294
      CRC10693_1
      FD514530.1
    Associated_feature: WBsf224438
  Experimental_info: RNAi_result: WBRNAi00020002 Inferred_automatically: RNAi_primary
      WBRNAi00002310 Inferred_automatically: RNAi_primary
      WBRNAi00055508 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021671
      Expr1159012
      Expr2007077
      Expr2025305
    Microarray_results (18)
    Expression_cluster (186)
  Map_info: Map: III Position: -22.6371
    Positive: Positive_clone: Y119D3B Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00065331
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene