WormBase Tree Display for Gene: WBGene00000515
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| WBGene00000515 | Evidence | Paper_evidence | WBPaper00005916 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T27A10 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | ckc-1 | |||||||
| Sequence_name | T27A10.3 | ||||||||
| Molecular_name | T27A10.3a | ||||||||
| T27A10.3a.1 | |||||||||
| CE07553 | |||||||||
| T27A10.3b | |||||||||
| CE33710 | |||||||||
| T27A10.3b.1 | |||||||||
| T27A10.3b.2 | |||||||||
| Other_name | CELE_T27A10.3 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | ckc-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ckc | ||||||||
| Allele (33) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00076543 | ||||||||
| 00076544 | |||||||||
| 00076545 | |||||||||
| 00076546 | |||||||||
| 00076547 | |||||||||
| Ortholog (38) | |||||||||
| Paralog | WBGene00000509 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00000510 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00000511 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00000512 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00000513 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00000514 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | ckc-1 encodes a putative ethanolamine or choline kinase, with somewhatmore sequence similarity to ethanolamine kinases; CKC-1 is the sole memberof a 'C' group of choline/ethanolamine kinases. | Paper_evidence | WBPaper00005916 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 11 Aug 2006 00:00:00 | ||||||||
| Automated_description | Predicted to enable ethanolamine kinase activity. Predicted to be involved in phosphatidylethanolamine biosynthetic process. Predicted to be located in cytoplasm. Is an ortholog of human ETNK2 (ethanolamine kinase 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T27A10.3a | |||||||
| T27A10.3b | |||||||||
| Corresponding_transcript | T27A10.3a.1 | ||||||||
| T27A10.3b.1 | |||||||||
| T27A10.3b.2 | |||||||||
| Other_sequence (26) | |||||||||
| Associated_feature | WBsf647956 | ||||||||
| WBsf662613 | |||||||||
| WBsf662614 | |||||||||
| WBsf1004668 | |||||||||
| WBsf1022637 | |||||||||
| WBsf235503 | |||||||||
| WBsf235504 | |||||||||
| WBsf235505 | |||||||||
| WBsf235506 | |||||||||
| WBsf235507 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00054255 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00083993 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019297 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00084001 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036014 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00084003 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012898 | ||||||||
| Expr1030305 | |||||||||
| Expr1157802 | |||||||||
| Expr2010030 | |||||||||
| Expr2028271 | |||||||||
| Drives_construct | WBCnstr00037483 | ||||||||
| Construct_product | WBCnstr00037483 | ||||||||
| Microarray_results (28) | |||||||||
| Expression_cluster (155) | |||||||||
| Interaction (59) | |||||||||
| Map_info | Map | X | Position | -10.0262 | |||||
| Positive | Positive_clone | T27A10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005916 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
