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WormBase Tree Display for Gene: WBGene00000967

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Name Class

WBGene00000967SMapS_parentSequenceT02E1
IdentityVersion2
NameCGC_namedhs-3Person_evidenceWBPerson651
Sequence_nameT02E1.5
Molecular_nameT02E1.5a
T02E1.5a.1
CE41004
T02E1.5b
CE41005
T02E1.5c
CE41006
T02E1.5b.1
T02E1.5c.1
Other_nameCELE_T02E1.5Accession_evidenceNDBBX284601
Public_namedhs-3
DB_infoDatabaseWormQTLgeneWBGene00000967
WormFluxgeneWBGene00000967
NDBlocus_tagCELE_T02E1.5
PanthergeneCAEEL|WormBase=WBGene00000967|UniProtKB=A5JYX5
familyPTHR24322
NCBIgene172603
RefSeqproteinNM_001129038.4
NM_001129037.4
NM_001129036.4
SwissProtUniProtAccA5JYX5
UniProt_GCRPUniProtAccA5JYX5
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:22WBPerson1971EventImportedInitial conversion from geneace
227 Apr 2007 10:07:20WBPerson1983EventAcquires_mergeWBGene00011377
Acquires_mergeWBGene00011377
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdhs
Allele (77)
RNASeq_FPKM (74)
GO_annotation00004745
00004746
00004747
00004748
00004749
00004750
00004751
00004752
00004753
00004754
Ortholog (46)
Paralog (38)
Structured_descriptionConcise_descriptiondhs-3 encodes a member of the short-chain dehydrogenases/reductases family (SDR) predicted to be mitochondrial.Paper_evidenceWBPaper00004424
Curator_confirmedWBPerson48
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor. Involved in response to oxidative stress. Located in lipid droplet. Expressed in intestinal cell. Is an ortholog of human SDR16C5 (short chain dehydrogenase/reductase family 16C member 5).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS290 version of WormBase
Date_last_updated11 Sep 2023 00:00:00
Molecular_infoCorresponding_CDST02E1.5a
T02E1.5b
T02E1.5c
Corresponding_CDS_historyT02E1.5:wp175
Corresponding_transcriptT02E1.5a.1
T02E1.5b.1
T02E1.5c.1
Other_sequence (79)
Associated_feature (11)
Experimental_infoRNAi_resultWBRNAi00035060Inferred_automaticallyRNAi_primary
WBRNAi00004105Inferred_automaticallyRNAi_primary
WBRNAi00052211Inferred_automaticallyRNAi_primary
WBRNAi00116815Inferred_automaticallyRNAi_primary
WBRNAi00001281Inferred_automaticallyRNAi_primary
WBRNAi00052212Inferred_automaticallyRNAi_primary
WBRNAi00035059Inferred_automaticallyRNAi_primary
Expr_patternExpr12410
Expr14388
Expr16186
Expr16187
Expr1018894
Expr1030602
Expr1155843
Expr2010917
Expr2029156
Drives_constructWBCnstr00021891
WBCnstr00023090
WBCnstr00037172
Construct_productWBCnstr00020984
WBCnstr00021891
WBCnstr00022296
WBCnstr00023090
WBCnstr00037172
AntibodyWBAntibody00002328
Microarray_results (34)
Expression_cluster (231)
Interaction (120)
Map_infoMapIPosition2.659Error0.008209
PositivePositive_cloneT02E1Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
Reference (22)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene