WormBase Tree Display for Gene: WBGene00013946
expand all nodes | collapse all nodes | view schema
| WBGene00013946 | SMap | S_parent | Sequence | ZK228 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | ZK228.3 | |||||||
| Molecular_name | ZK228.3 | ||||||||
| ZK228.3.1 | |||||||||
| CE24719 | |||||||||
| Other_name | CELE_ZK228.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | ZK228.3 | ||||||||
| DB_info | Database | AceView | gene | 5S940 | |||||
| WormQTL | gene | WBGene00013946 | |||||||
| WormFlux | gene | WBGene00013946 | |||||||
| NDB | locus_tag | CELE_ZK228.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013946|UniProtKB=O46009 | |||||||
| family | PTHR47408 | ||||||||
| NCBI | gene | 180200 | |||||||
| RefSeq | protein | NM_075213.6 | |||||||
| TREEFAM | TREEFAM_ID | TF316369 | |||||||
| TrEMBL | UniProtAcc | O46009 | |||||||
| UniProt_GCRP | UniProtAcc | O46009 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (83) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (31) | |||||||||
| Paralog (24) | |||||||||
| Structured_description | Automated_description | Enriched in intestine and muscle cell based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by twenty-one chemicals including diallyl trisulfide; Tunicamycin; and indole based on microarray; RNA-seq; and proteomic studies. Is predicted to encode a protein with the following domains: YitH/HolE, acetyltransferase (GNAT) domain; Acyl-CoA N-acyltransferase; and Acetyltransferase (GNAT) domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK228.3 | |||||||
| Corresponding_transcript | ZK228.3.1 | ||||||||
| Other_sequence (54) | |||||||||
| Associated_feature | WBsf1002908 | ||||||||
| WBsf1002909 | |||||||||
| WBsf1021480 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00038234 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00021921 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059289 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr8221 | ||||||||
| Expr1027583 | |||||||||
| Expr1162719 | |||||||||
| Expr2008795 | |||||||||
| Expr2027028 | |||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (224) | |||||||||
| Interaction | WBInteraction000457954 | ||||||||
| Map_info | Positive | Positive_clone | ZK228 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 16.4874 | |||||||
| Reference | WBPaper00031003 | ||||||||
| WBPaper00032031 | |||||||||
| Method | Gene |
