WormBase Tree Display for Gene: WBGene00012538
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| WBGene00012538 | SMap | S_parent | Sequence | Y37A1B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | semo-1 | Person_evidence | WBPerson3185 | |||||
| Sequence_name | Y37A1B.5 | ||||||||
| Molecular_name | Y37A1B.5a | ||||||||
| Y37A1B.5a.1 | |||||||||
| CE19075 | |||||||||
| Y37A1B.5b | |||||||||
| CE44562 | |||||||||
| Y37A1B.5b.1 | |||||||||
| Y37A1B.5c | |||||||||
| Other_name | CELE_Y37A1B.5 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | semo-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 10 Sep 2020 13:52:41 | WBPerson1983 | Name_change | CGC_name | semo-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | semo | ||||||||
| Allele (143) | |||||||||
| Possibly_affected_by | WBVar02157820 | ||||||||
| Strain | WBStrain00001724 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00104342 | ||||||||
| 00104343 | |||||||||
| 00119630 | |||||||||
| Ortholog (39) | |||||||||
| Paralog | WBGene00011249 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enables methanethiol oxidase activity. Expressed in hypodermal cell. Human ortholog(s) of this gene implicated in glaucoma. Is an ortholog of human SELENBP1 (selenium binding protein 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:1686 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10719) | ||||
| Molecular_info | Corresponding_CDS | Y37A1B.5a | |||||||
| Y37A1B.5b | |||||||||
| Corresponding_transcript | Y37A1B.5c | ||||||||
| Y37A1B.5a.1 | |||||||||
| Y37A1B.5b.1 | |||||||||
| Other_sequence (39) | |||||||||
| Associated_feature | WBsf1018595 | ||||||||
| WBsf229475 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00055856 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00020206 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (11) | |||||||||
| Drives_construct | WBCnstr00002549 | ||||||||
| WBCnstr00004373 | |||||||||
| WBCnstr00019922 | |||||||||
| WBCnstr00041572 | |||||||||
| Construct_product | WBCnstr00041572 | ||||||||
| Regulate_expr_cluster | WBPaper00058648:Y37A1B.5(RNAi)_downregulated | ||||||||
| WBPaper00058648:Y37A1B.5(RNAi)_upregulated | |||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (270) | |||||||||
| Interaction | WBInteraction000363177 | ||||||||
| WBInteraction000388085 | |||||||||
| WBInteraction000519376 | |||||||||
| WBInteraction000549759 | |||||||||
| WBInteraction000560231 | |||||||||
| WBInteraction000574144 | |||||||||
| WBInteraction000577964 | |||||||||
| WBInteraction000578682 | |||||||||
| WBInteraction000580822 | |||||||||
| Map_info | Positive | Positive_clone | Y37A1B | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 11.2977 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00058648 | |||||||||
| WBPaper00061889 | |||||||||
| WBPaper00062590 | |||||||||
| WBPaper00062649 | |||||||||
| WBPaper00062864 | |||||||||
| WBPaper00065026 | |||||||||
| WBPaper00065721 | |||||||||
| Method | Gene |
