WormBase Tree Display for Gene: WBGene00008258
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| WBGene00008258 | SMap | S_parent | Sequence | C52E4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mans-2 | Paper_evidence | WBPaper00041024 | |||||
| Person_evidence | WBPerson2099 | ||||||||
| Sequence_name | C52E4.5 | ||||||||
| Molecular_name | C52E4.5 | ||||||||
| C52E4.5.1 | |||||||||
| CE08947 | |||||||||
| Other_name | CELE_C52E4.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | mans-2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 11 May 2012 16:05:19 | WBPerson2970 | Name_change | CGC_name | mans-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mans | ||||||||
| Allele (45) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Ortholog (46) | |||||||||
| Paralog | WBGene00013881 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00020197 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00008411 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00008148 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00008646 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00013919 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | mans-2 is an ortholog of human MAN1A1 (mannosidase, alpha1A, member 1), MAN1C1 (mannosidase, alpha1C, member 1) and MAN1A2 (mannosidase, alpha1A, member 2); mans-2 has a calcium ion dependent mannosyl-oligosaccharide 1,2-alpha-mannosidase activity, based on enzymatic assay, with Man6GlcNAc2 as a final product. | Paper_evidence | WBPaper00041024 | |||||
| Person_evidence | WBPerson2099 | ||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 10 Feb 2016 00:00:00 | ||||||||
| Automated_description | Predicted to enable mannosyl-oligosaccharide 1,2-alpha-mannosidase activity. Predicted to be involved in carbohydrate metabolic process and protein glycosylation. Predicted to be located in Golgi membrane and endoplasmic reticulum. Is an ortholog of human MAN1A2 (mannosidase alpha class 1A member 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C52E4.5 | |||||||
| Corresponding_CDS_history | C52E4.5b:wp261 | ||||||||
| Corresponding_transcript | C52E4.5.1 | ||||||||
| Other_sequence (39) | |||||||||
| Associated_feature | WBsf653173 | ||||||||
| WBsf669439 | |||||||||
| WBsf718416 | |||||||||
| WBsf1001497 | |||||||||
| WBsf1020524 | |||||||||
| WBsf234603 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00012324 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00030089 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043050 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00078163 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012754 | ||||||||
| Expr1033586 | |||||||||
| Expr1147011 | |||||||||
| Expr2013370 | |||||||||
| Expr2031602 | |||||||||
| Drives_construct | WBCnstr00033108 | ||||||||
| Construct_product | WBCnstr00033108 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (178) | |||||||||
| Interaction (18) | |||||||||
| Map_info | Map | V | Position | 3.56412 | |||||
| Positive | Positive_clone | C52E4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061547 | |||||||||
| WBPaper00065080 | |||||||||
| WBPaper00065331 | |||||||||
| WBPaper00065357 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
