WormBase Tree Display for Gene: WBGene00015913
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| WBGene00015913 | SMap | S_parent | Sequence | C17F4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C17F4.7 | |||||||
| Molecular_name | C17F4.7 | ||||||||
| C17F4.7.1 | |||||||||
| CE27076 | |||||||||
| Other_name | CELE_C17F4.7 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | C17F4.7 | ||||||||
| DB_info | Database | AceView | gene | 2D536 | |||||
| WormQTL | gene | WBGene00015913 | |||||||
| WormFlux | gene | WBGene00015913 | |||||||
| NDB | locus_tag | CELE_C17F4.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015913|UniProtKB=Q9BKP8 | |||||||
| family | PTHR35573 | ||||||||
| NCBI | gene | 173668 | |||||||
| RefSeq | protein | NM_062086.10 | |||||||
| TREEFAM | TREEFAM_ID | TF315552 | |||||||
| TrEMBL | UniProtAcc | Q9BKP8 | |||||||
| UniProt_GCRP | UniProtAcc | Q9BKP8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (87) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (38) | |||||||||
| Paralog | WBGene00018342 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021768 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00022747 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00018343 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in cholinergic neurons; head mesodermal cell; intestine; pharyngeal cell; and retrovesicular ganglion based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; proteomic; and RNA-seq studies. Is affected by twenty chemicals including cholesterol; lathosterol; and Heme based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C17F4.7 | |||||||
| Corresponding_transcript | C17F4.7.1 | ||||||||
| Other_sequence (13) | |||||||||
| Associated_feature | WBsf649960 | ||||||||
| WBsf222834 | |||||||||
| WBsf222835 | |||||||||
| WBsf222836 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00040826 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1011638 | ||||||||
| Expr1036803 | |||||||||
| Expr1144869 | |||||||||
| Expr2000920 | |||||||||
| Expr2019141 | |||||||||
| Drives_construct | WBCnstr00028461 | ||||||||
| Construct_product | WBCnstr00028461 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (258) | |||||||||
| Interaction | WBInteraction000550146 | ||||||||
| WBInteraction000554243 | |||||||||
| WBInteraction000560171 | |||||||||
| Map_info | Positive | Positive_clone | C17F4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -7.31988 | |||||||
| Reference | WBPaper00058665 | ||||||||
| WBPaper00062388 | |||||||||
| Method | Gene |
