WormBase Tree Display for Gene: WBGene00018342
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| WBGene00018342 | SMap | S_parent | Sequence | F42A10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F42A10.6 | |||||||
| Molecular_name | F42A10.6 | ||||||||
| F42A10.6.1 | |||||||||
| CE01297 | |||||||||
| Other_name | CELE_F42A10.6 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | F42A10.6 | ||||||||
| DB_info | Database | AceView | gene | 3H266 | |||||
| WormQTL | gene | WBGene00018342 | |||||||
| WormFlux | gene | WBGene00018342 | |||||||
| NDB | locus_tag | CELE_F42A10.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018342|UniProtKB=Q20311 | |||||||
| family | PTHR35573 | ||||||||
| NCBI | gene | 175874 | |||||||
| RefSeq | protein | NM_065939.8 | |||||||
| TREEFAM | TREEFAM_ID | TF315552 | |||||||
| TrEMBL | UniProtAcc | Q20311 | |||||||
| UniProt_GCRP | UniProtAcc | Q20311 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (12) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (34) | |||||||||
| Paralog | WBGene00015913 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021768 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00022747 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00018343 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in ABplpppppp; ABprpppppp; mechanosensory neurons; and somatic gonad precursor based on SAGE; Chronogram; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; proteomic; and RNA-seq studies. Is affected by twenty-five chemicals including Ethanol; methylmercuric chloride; and Mercuric Chloride based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F42A10.6 | |||||||
| Corresponding_transcript | F42A10.6.1 | ||||||||
| Other_sequence | CRC11450_1 | ||||||||
| CR03447 | |||||||||
| CBC03247_1 | |||||||||
| Associated_feature | WBsf666975 | ||||||||
| WBsf666976 | |||||||||
| WBsf992667 | |||||||||
| WBsf992668 | |||||||||
| WBsf1015044 | |||||||||
| WBsf226776 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00047060 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00005924 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014794 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047059 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032119 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram208 | ||||||||
| Expr4359 | |||||||||
| Expr6036 | |||||||||
| Expr1021602 | |||||||||
| Expr1150922 | |||||||||
| Expr2003620 | |||||||||
| Expr2021838 | |||||||||
| Drives_construct | WBCnstr00003830 | ||||||||
| WBCnstr00011942 | |||||||||
| WBCnstr00026597 | |||||||||
| Construct_product | WBCnstr00026597 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (233) | |||||||||
| Interaction (84) | |||||||||
| Map_info | Positive | Positive_clone | F42A10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -1.41019 | |||||||
| Reference | WBPaper00028802 | ||||||||
| WBPaper00058665 | |||||||||
| Method | Gene |
