WormBase Tree Display for Gene: WBGene00015913

WBGene00015913 SMap: S_parent: Sequence: C17F4
  Identity: Version: 1
    Name: Sequence_name: C17F4.7
      Molecular_name: C17F4.7
        C17F4.7.1
        CE27076
      Other_name: CELE_C17F4.7 Accession_evidence: NDB BX284602
      Public_name: C17F4.7
    DB_info: Database: AceView gene 2D536
        WormQTL gene WBGene00015913
        WormFlux gene WBGene00015913
        NDB locus_tag CELE_C17F4.7
        Panther gene CAEEL|WormBase=WBGene00015913|UniProtKB=Q9BKP8
          family PTHR35573
        NCBI gene 173668
        RefSeq protein NM_062086.10
        TREEFAM TREEFAM_ID TF315552
        TrEMBL UniProtAcc Q9BKP8
        UniProt_GCRP UniProtAcc Q9BKP8
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (87)
    RNASeq_FPKM (74)
    Ortholog: WBGene00040752 Caenorhabditis briggsae From_analysis: OMA
            WormBase-Compara
      WBGene00060526 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00132674 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00143956 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00221568 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g10197 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g13856 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g13857 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g5013 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g7399 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g3023 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g548 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g13356 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g2900 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g23947 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g4882 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00123.g4977 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_I.g576 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g8425 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01898.g23767 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_17386 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_001138 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g06941 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g13340 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g12095 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g12096 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10239200 Caenorhabditis inopinata From_analysis: WormBase-Compara
      Sp34_50026500 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g3916 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00246700 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00097424 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00273161 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00259217 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00263765 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00287045 Trichuris muris From_analysis: WormBase-Compara
      WBGene00292504 Trichuris muris From_analysis: WormBase-Compara
      WBGene00297644 Trichuris muris From_analysis: WormBase-Compara
      WBGene00297645 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00018342 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00021768 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00022747 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00018343 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Enriched in cholinergic neurons; head mesodermal cell; intestine; pharyngeal cell; and retrovesicular ganglion based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; proteomic; and RNA-seq studies. Is affected by twenty chemicals including cholesterol; lathosterol; and Heme based on microarray and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C17F4.7
    Corresponding_transcript: C17F4.7.1
    Other_sequence (13)
    Associated_feature: WBsf649960
      WBsf222834
      WBsf222835
      WBsf222836
  Experimental_info: RNAi_result: WBRNAi00040826 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1011638
      Expr1036803
      Expr1144869
      Expr2000920
      Expr2019141
    Drives_construct: WBCnstr00028461
    Construct_product: WBCnstr00028461
    Microarray_results (15)
    Expression_cluster (258)
    Interaction: WBInteraction000550146
      WBInteraction000554243
      WBInteraction000560171
  Map_info: Positive: Positive_clone: C17F4 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II -7.31988
  Reference: WBPaper00058665
    WBPaper00062388
  Method: Gene