WormBase Tree Display for Gene: WBGene00003526
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| WBGene00003526 | Evidence | Author_evidence | Moehrlen F | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C07D10 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | nas-7 | Person_evidence | WBPerson1103 | |||||
| Sequence_name | C07D10.4 | ||||||||
| Molecular_name | C07D10.4 | ||||||||
| C07D10.4.1 | |||||||||
| CE34663 | |||||||||
| Other_name | CELE_C07D10.4 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | nas-7 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nas | ||||||||
| Allele (26) | |||||||||
| Strain | WBStrain00032949 | ||||||||
| WBStrain00040027 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Ortholog (41) | |||||||||
| Paralog (48) | |||||||||
| Structured_description | Concise_description | nas-7 encodes an astacin-like metalloprotease; a NAS-7::GFP reporter fusion is first expressed in embryos just prior to hatching and, in adult animals, is seen in anterior cells adjacent to the pharyngeal metacarpus and terminal bulb. | Paper_evidence | WBPaper00006254 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 15 Feb 2008 00:00:00 | ||||||||
| Automated_description | Predicted to enable metalloendopeptidase activity. Involved in pharyngeal pumping and pharynx development. Predicted to be located in extracellular region. Expressed in several structures, including arcade cell; hypodermis; pharyngeal cell; spermatheca; and vulva. Is an ortholog of human ASTL (astacin like metalloendopeptidase). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | EFO:MONDO:0014769 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:31704) | ||||
| Molecular_info | Corresponding_CDS | C07D10.4 | |||||||
| Corresponding_CDS_history | C07D10.4:wp104 | ||||||||
| Corresponding_transcript | C07D10.4.1 | ||||||||
| Other_sequence (11) | |||||||||
| Associated_feature | WBsf650230 | ||||||||
| WBsf717703 | |||||||||
| WBsf988434 | |||||||||
| WBsf988435 | |||||||||
| WBsf1012524 | |||||||||
| WBsf223338 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00028626 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00088980 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039992 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00010381 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00072236 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00073931 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00073933 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00073932 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00073930 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr2804 | ||||||||
| Expr5197 | |||||||||
| Expr8910 | |||||||||
| Expr1018916 | |||||||||
| Expr1031614 | |||||||||
| Expr1144071 | |||||||||
| Expr2013890 | |||||||||
| Expr2032130 | |||||||||
| Drives_construct | WBCnstr00003228 | ||||||||
| WBCnstr00010957 | |||||||||
| WBCnstr00013604 | |||||||||
| WBCnstr00036070 | |||||||||
| Construct_product | WBCnstr00010957 | ||||||||
| WBCnstr00013604 | |||||||||
| WBCnstr00036070 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (204) | |||||||||
| Interaction (17) | |||||||||
| Map_info | Map | II | Position | 0.50294 | Error | 1.5e-05 | |||
| Positive | Positive_clone | C07D10 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00006254 | ||||||||
| WBPaper00035910 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00066129 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
