WormBase Tree Display for Gene: WBGene00004198
expand all nodes | collapse all nodes | view schema
| WBGene00004198 | SMap | S_parent | Sequence | F32A5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | prx-13 | |||||||
| Sequence_name | F32A5.6 | ||||||||
| Molecular_name | F32A5.6 | ||||||||
| F32A5.6.1 | |||||||||
| CE28290 | |||||||||
| Other_name | CELE_F32A5.6 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | prx-13 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | prx | ||||||||
| Allele (22) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog (37) | |||||||||
| Structured_description | Concise_description | prx-13 is orthologous to the human gene PEX13 (OMIM:601789), which when mutated leads to Zellweger syndrome or neonatal adrenoleukodystrophy. | Curator_confirmed | WBPerson1823 | |||||
| WBPerson567 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Involved in nematode larval development. Predicted to be located in peroxisomal membrane. Predicted to be part of peroxisomal importomer complex. Human ortholog(s) of this gene implicated in peroxisome biogenesis disorder 11A. Is an ortholog of human PEX13 (peroxisomal biogenesis factor 13). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080485 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8855) | ||||
| DOID:0080377 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8855) | ||||||
| Molecular_info | Corresponding_CDS | F32A5.6 | |||||||
| Corresponding_transcript | F32A5.6.1 | ||||||||
| Other_sequence (33) | |||||||||
| Associated_feature | WBsf650218 | ||||||||
| WBsf665679 | |||||||||
| WBsf223317 | |||||||||
| Experimental_info | RNAi_result (13) | ||||||||
| Expr_pattern | Expr1015320 | ||||||||
| Expr1149968 | |||||||||
| Expr2015121 | |||||||||
| Expr2033359 | |||||||||
| Drives_construct | WBCnstr00035642 | ||||||||
| Construct_product | WBCnstr00035642 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (119) | |||||||||
| Interaction (59) | |||||||||
| Map_info | Map | II | Position | 0.499802 | Error | 4.1e-05 | |||
| Positive | Positive_clone | F32A5 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005877 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056693 | |||||||||
| WBPaper00059323 | |||||||||
| Remark | Note that some Authors have incorrectly published prx genes as pex genes. pex genes are a separate class of gene not related to prx genes [JAH][030108 ck1] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
