WormBase Tree Display for Gene: WBGene00001564
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| WBGene00001564 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | CHROMOSOME_V | ||||||
| Identity | Version | 2 | |||||||
| Name | CGC_name | icl-1 | |||||||
| Sequence_name | C05E4.9 | ||||||||
| Molecular_name | C05E4.9a | ||||||||
| C05E4.9a.1 | |||||||||
| CE23521 | |||||||||
| C05E4.9b | |||||||||
| CE32565 | |||||||||
| C05E4.9b.1 | |||||||||
| Other_name | gei-7 | Person_evidence | WBPerson1796 | ||||||
| CELE_C05E4.9 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | icl-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 16 Nov 2010 10:48:21 | WBPerson2970 | Name_change | CGC_name | icl-1 | ||||
| Other_name | gei-1 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | icl | ||||||||
| Allele (202) | |||||||||
| Strain | WBStrain00031479 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (22) | |||||||||
| Ortholog (34) | |||||||||
| Paralog | WBGene00007461 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | |||||
| Structured_description | Concise_description | icl-1 encodes a predicted isocitrate lyase/malate synthase, an enzyme known to function in the glyoxylate cycle; ICL-1 was identified in a screen for proteins that interact with GEX-3, a homolog of human HEM-2 which is required for embryonic development; ICL-1 appears to act downstream of DAF-16 to influence lifespan. | Paper_evidence | WBPaper00005194 | |||||
| WBPaper00005976 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson324 | |||||||||
| Date_last_updated | 28 Jul 2015 00:00:00 | ||||||||
| Automated_description | Predicted to enable isocitrate lyase activity and malate synthase activity. Involved in determination of adult lifespan. Located in mitochondrion. Expressed in hypodermal cell and pharynx. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C05E4.9a | |||||||
| C05E4.9b | |||||||||
| Corresponding_transcript | C05E4.9a.1 | ||||||||
| C05E4.9b.1 | |||||||||
| Other_sequence (163) | |||||||||
| Associated_feature (30) | |||||||||
| Experimental_info | RNAi_result (16) | ||||||||
| Expr_pattern | Expr12926 | ||||||||
| Expr16185 | |||||||||
| Expr1025997 | |||||||||
| Expr1030934 | |||||||||
| Expr1143874 | |||||||||
| Expr2012664 | |||||||||
| Expr2030900 | |||||||||
| Drives_construct | WBCnstr00023102 | ||||||||
| WBCnstr00036858 | |||||||||
| WBCnstr00037971 | |||||||||
| Construct_product | WBCnstr00023102 | ||||||||
| WBCnstr00036858 | |||||||||
| WBCnstr00037971 | |||||||||
| Antibody | WBAntibody00000097 | ||||||||
| Microarray_results (33) | |||||||||
| Expression_cluster (420) | |||||||||
| Interaction (81) | |||||||||
| WBProcess | WBbiopr:00000001 | ||||||||
| Map_info | Map | V | Position | -19.959 | |||||
| Positive | Positive_clone | C05E4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4342 | |||||||
| 4699 | |||||||||
| 5353 | |||||||||
| 5485 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (31) | |||||||||
| Remark | Sequence connection from [Qadota H, Kaibuchi K] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
