WormBase Tree Display for Gene: WBGene00001790
expand all nodes | collapse all nodes | view schema
| WBGene00001790 | Evidence | Person_evidence | WBPerson1846 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | D1053 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | gst-42 | |||||||
| Sequence_name | D1053.1 | ||||||||
| Molecular_name | D1053.1 | ||||||||
| D1053.1.1 | |||||||||
| CE03099 | |||||||||
| Other_name | CELE_D1053.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | gst-42 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gst | ||||||||
| Allele (32) | |||||||||
| Strain | WBStrain00033920 | ||||||||
| WBStrain00032388 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (18) | |||||||||
| Ortholog (32) | |||||||||
| Paralog | WBGene00021817 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00001791 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00001365 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00001371 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00001792 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00008920 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00015337 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00016204 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00019636 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00043097 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | gst-42 is orthologous to the human gene GLUTATHIONE TRANSFERASE ZETA-1 (also known as MALEYLACETOACETATE ISOMERASE; GSTZ1; OMIM:603758), which when mutated is thought to lead to a variety of type I tyrosinemia. | Curator_confirmed | WBPerson1823 | |||||
| WBPerson567 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enables identical protein binding activity. Predicted to be involved in L-phenylalanine catabolic process and glutathione metabolic process. Predicted to be located in mitochondrion. Expressed in intestine. Is an ortholog of human GSTZ1 (glutathione S-transferase zeta 1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | D1053.1 | |||||||
| Corresponding_transcript | D1053.1.1 | ||||||||
| Other_sequence (27) | |||||||||
| Associated_feature | WBsf654443 | ||||||||
| WBsf671056 | |||||||||
| WBsf671057 | |||||||||
| WBsf1007098 | |||||||||
| WBsf1023927 | |||||||||
| WBsf237997 | |||||||||
| WBsf237998 | |||||||||
| WBsf237999 | |||||||||
| WBsf238000 | |||||||||
| WBsf238001 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00115551 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00043381 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030339 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00115488 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012524 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram232 | ||||||||
| Expr3792 | |||||||||
| Expr1015984 | |||||||||
| Expr1031053 | |||||||||
| Expr1147367 | |||||||||
| Expr2012325 | |||||||||
| Expr2030562 | |||||||||
| Drives_construct | WBCnstr00001071 | ||||||||
| WBCnstr00011663 | |||||||||
| WBCnstr00015944 | |||||||||
| WBCnstr00036682 | |||||||||
| Construct_product | WBCnstr00036682 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (204) | |||||||||
| Interaction (60) | |||||||||
| Map_info | Map | X | Position | 6.53295 | Error | 0.086971 | |||
| Positive | Positive_clone | D1053 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00006465 | ||||||||
| WBPaper00031468 | |||||||||
| WBPaper00032062 | |||||||||
| WBPaper00035663 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00057218 | |||||||||
| WBPaper00065140 | |||||||||
| WBPaper00065331 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
