WormBase Tree Display for Gene: WBGene00011938
expand all nodes | collapse all nodes | view schema
| WBGene00011938 | SMap | S_parent | Sequence | T22H6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | alh-13 | Person_evidence | WBPerson651 | |||||
| Sequence_name | T22H6.2 | ||||||||
| Molecular_name | T22H6.2a | ||||||||
| T22H6.2a.1 | |||||||||
| CE47944 | |||||||||
| T22H6.2b | |||||||||
| CE47964 | |||||||||
| T22H6.2b.1 | |||||||||
| Other_name | CELE_T22H6.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | alh-13 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Jan 2009 11:33:00 | WBPerson2970 | Name_change | CGC_name | alh-13 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | alh | ||||||||
| Allele (61) | |||||||||
| Strain | WBStrain00001713 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (27) | |||||||||
| Ortholog (35) | |||||||||
| Structured_description | Automated_description | Predicted to enable glutamate-5-semialdehyde dehydrogenase activity. Predicted to be involved in L-proline biosynthetic process and phosphorylation. Located in mitochondrion. Human ortholog(s) of this gene implicated in several diseases, including cutis laxa (multiple); enterocele; and hereditary spastic paraplegia (multiple). Is an ortholog of human ALDH18A1 (aldehyde dehydrogenase 18 family member A1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0110825 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9722) | ||||
| DOID:0110824 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9722) | ||||||
| DOID:0070143 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9722) | ||||||
| DOID:0070131 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9722) | ||||||
| DOID:1283 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9722) | ||||||
| DOID:2476 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9722) | ||||||
| DOID:0070132 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9722) | ||||||
| DOID:83 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9722) | ||||||
| Molecular_info | Corresponding_CDS | T22H6.2a | |||||||
| T22H6.2b | |||||||||
| Corresponding_CDS_history | T22H6.2:wp42 | ||||||||
| Corresponding_transcript | T22H6.2a.1 | ||||||||
| T22H6.2b.1 | |||||||||
| Other_sequence (56) | |||||||||
| Associated_feature | WBsf648627 | ||||||||
| WBsf663444 | |||||||||
| WBsf663445 | |||||||||
| WBsf663446 | |||||||||
| WBsf663447 | |||||||||
| WBsf1007420 | |||||||||
| WBsf236510 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00096926 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00090699 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00096927 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053869 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035830 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00096986 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009210 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00026362 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00071636 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr6745 | ||||||||
| Expr1024987 | |||||||||
| Expr1035269 | |||||||||
| Expr1157418 | |||||||||
| Expr2009302 | |||||||||
| Expr2027539 | |||||||||
| Drives_construct | WBCnstr00002537 | ||||||||
| WBCnstr00030267 | |||||||||
| Construct_product | WBCnstr00030267 | ||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (248) | |||||||||
| Interaction (78) | |||||||||
| Map_info | Map | X | Position | 8.39739 | |||||
| Positive | Positive_clone | T22H6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038341 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00040958 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061842 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
