WormBase Tree Display for Gene: WBGene00003647

WBGene00003647 Evidence: Paper_evidence: WBPaper00003416
  SMap: S_parent: Sequence: T05B4
  Identity: Version: 1
    Name: CGC_name: nhr-57 Person_evidence: WBPerson600
      Sequence_name: T05B4.2
      Molecular_name: T05B4.2
        T05B4.2.1
        CE13195
      Other_name: CELE_T05B4.2 Accession_evidence: NDB BX284605
      Public_name: nhr-57
    DB_info: Database: AceView gene 5E613
        WormQTL gene WBGene00003647
        WormFlux gene WBGene00003647
        NDB locus_tag CELE_T05B4.2
        Panther gene CAEEL|WormBase=WBGene00003647|UniProtKB=O16425
          family PTHR46011
        NCBI gene 178813
        RefSeq protein NM_071752.8
        SwissProt UniProtAcc O16425
        TREEFAM TREEFAM_ID TF316453
        UniProt_GCRP UniProtAcc O16425
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:32 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nhr
    Allele (158)
    RNASeq_FPKM (74)
    GO_annotation (14)
    Ortholog (26)
    Paralog (217)
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity. Involved in response to hypoxia. Predicted to be located in nucleus. Expressed in several structures, including cephalic sheath cell; ciliated neurons; excretory system; intestine; and vulva. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T05B4.2
    Corresponding_transcript: T05B4.2.1
    Associated_feature: WBsf646741
      WBsf655087
      WBsf661206
      WBsf661207
      WBsf978619
      WBsf981919
      WBsf231636
      WBsf231637
      WBsf231638
    Transcription_factor: WBTranscriptionFactor000294
  Experimental_info: RNAi_result: WBRNAi00093233 Inferred_automatically: RNAi_primary
      WBRNAi00000471 Inferred_automatically: RNAi_primary
      WBRNAi00115856 Inferred_automatically: RNAi_primary
      WBRNAi00093232 Inferred_automatically: RNAi_primary
      WBRNAi00098154 Inferred_automatically: RNAi_primary
      WBRNAi00060974 Inferred_automatically: RNAi_primary
      WBRNAi00098183 Inferred_automatically: RNAi_primary
      WBRNAi00035180 Inferred_automatically: RNAi_primary
      WBRNAi00052471 Inferred_automatically: RNAi_primary
      WBRNAi00018205 Inferred_automatically: RNAi_primary
    Expr_pattern (13)
    Drives_construct: WBCnstr00000623
      WBCnstr00010133
      WBCnstr00012796
      WBCnstr00014226
      WBCnstr00015290
      WBCnstr00015291
      WBCnstr00015292
      WBCnstr00035973
      WBCnstr00041075
    Construct_product: WBCnstr00010133
      WBCnstr00035973
      WBCnstr00041075
    Microarray_results (28)
    Expression_cluster (178)
    Interaction (22)
    WBProcess: WBbiopr:00000054
  Map_info: Map: V Position: -6.43458 Error: 0.00801
    Positive: Positive_clone: T05B4 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (15)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene