WormBase Tree Display for Gene: WBGene00001506
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| WBGene00001506 | Evidence | Paper_evidence | WBPaper00005523 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | EGAP9 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | fut-2 | |||||||
| Sequence_name | EGAP9.2 | ||||||||
| Molecular_name | EGAP9.2 | ||||||||
| EGAP9.2.1 | |||||||||
| CE09151 | |||||||||
| Other_name | CE2FT-1 | ||||||||
| CELE_EGAP9.2 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | fut-2 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fut | ||||||||
| Allele (29) | |||||||||
| Strain | WBStrain00035623 | ||||||||
| WBStrain00036090 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (45) | |||||||||
| Paralog (23) | |||||||||
| Structured_description | Concise_description | fut-2 encodes a unique alpha 1,2-fucosyltransferase specifically expressed in intestinal cells of larval and adult animals; recombinant FUT-2 expressed in human 293T cells exhibits a novel acceptor specificity profile compared with mammalian alpha 1,2-fucosyltransferases and the predicted protein shares very low amino acid identity with human alpha 1,2-fucosyltransferases, but its predicted type 2 topology and domain structure are typical of other glucosyltransferases. | Paper_evidence | WBPaper00005523 | |||||
| Curator_confirmed | WBPerson48 | ||||||||
| Date_last_updated | 08 Feb 2006 00:00:00 | ||||||||
| Automated_description | Enables galactoside 2-alpha-L-fucosyltransferase activity. Involved in macromolecule glycosylation. Predicted to be located in Golgi cisterna membrane. Expressed in intestinal cell. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | EGAP9.2 | |||||||
| Corresponding_transcript | EGAP9.2.1 | ||||||||
| Associated_feature | WBsf652718 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00103249 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00030519 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012713 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043715 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr2254 | ||||||||
| Expr2255 | |||||||||
| Expr1026999 | |||||||||
| Expr1147699 | |||||||||
| Expr2011920 | |||||||||
| Expr2030157 | |||||||||
| Drives_construct | WBCnstr00010731 | ||||||||
| WBCnstr00036903 | |||||||||
| Construct_product | WBCnstr00036903 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (169) | |||||||||
| Interaction | WBInteraction000158051 | ||||||||
| WBInteraction000191673 | |||||||||
| Map_info | Map | V | Position | 0.107755 | Error | 0.000463 | |||
| Positive | Positive_clone | EGAP9 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 5361 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005523 | ||||||||
| WBPaper00029024 | |||||||||
| WBPaper00031495 | |||||||||
| Remark | Sequence connection from [Zheng Q, Van Die I, Cummings RD] [020904 ck1] | ||||||||
| fut-2 published as CE2FT-1 [JAH][020912 ck1] | |||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
