WormBase Tree Display for Gene: WBGene00009155
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| WBGene00009155 | SMap | S_parent | Sequence | F26D10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | lhfp-4 | Person_evidence | WBPerson105 | |||||
| Sequence_name | F26D10.11 | ||||||||
| Molecular_name | F26D10.11 | ||||||||
| F26D10.11.1 | |||||||||
| CE19811 | |||||||||
| Other_name | CELE_F26D10.11 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | lhfp-4 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 30 Nov 2015 15:03:18 | WBPerson2970 | Name_change | CGC_name | lhfp-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lhfp | ||||||||
| Allele (79) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00102855 | ||||||||
| 00102856 | |||||||||
| 00102857 | |||||||||
| 00102858 | |||||||||
| Ortholog (40) | |||||||||
| Structured_description | Concise_description | F26D10.11 encodes an ortholog of murine TMHS (mutated in hurry-scurry/hscy mice), a predicted tetraspan membrane protein required for stereociliary function and a possible ortholog of human DFNB53; the cysteine mutated in hscy mice is conserved in F26D10.11. | Paper_evidence | WBPaper00028313 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 18 Jul 2005 00:00:00 | ||||||||
| Automated_description | Predicted to be involved in sensory perception of sound. Predicted to be located in plasma membrane. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 67. Is an ortholog of human LHFPL4 (LHFPL tetraspan subfamily member 4). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0110518 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:21253) | ||||
| Molecular_info | Corresponding_CDS | F26D10.11 | |||||||
| Corresponding_transcript | F26D10.11.1 | ||||||||
| Other_sequence | Oden_isotig16556 | ||||||||
| Tcol_isotig24278 | |||||||||
| CR07851 | |||||||||
| CRC11884_1 | |||||||||
| Acan_isotig05713 | |||||||||
| Associated_feature | WBsf660982 | ||||||||
| WBsf718261 | |||||||||
| WBsf999014 | |||||||||
| WBsf999015 | |||||||||
| WBsf999016 | |||||||||
| WBsf1018975 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00045607 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00013921 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031431 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021492 | ||||||||
| Expr1149519 | |||||||||
| Expr2013147 | |||||||||
| Expr2031379 | |||||||||
| Drives_construct | WBCnstr00032417 | ||||||||
| Construct_product | WBCnstr00032417 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (145) | |||||||||
| Interaction (77) | |||||||||
| Map_info | Map | IV | Position | 16.3271 | |||||
| Positive | Positive_clone | F26D10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
