WormBase Tree Display for Gene: WBGene00007533
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| WBGene00007533 | SMap | S_parent | Sequence | C12C8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cbl-1 | Person_evidence | WBPerson151 | |||||
| WBPerson14155 | |||||||||
| Sequence_name | C12C8.2 | ||||||||
| Molecular_name | C12C8.2a | ||||||||
| C12C8.2a.1 | |||||||||
| CE36100 | |||||||||
| C12C8.2b | |||||||||
| CE40901 | |||||||||
| C12C8.2b.1 | |||||||||
| Other_name | CELE_C12C8.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | cbl-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 31 Aug 2011 09:11:34 | WBPerson2970 | Name_change | CGC_name | cbl-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cbl | ||||||||
| Allele (27) | |||||||||
| Strain | WBStrain00032944 | ||||||||
| WBStrain00037169 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00004777 | ||||||||
| 00004778 | |||||||||
| 00004779 | |||||||||
| 00004780 | |||||||||
| 00004781 | |||||||||
| 00004782 | |||||||||
| 00004783 | |||||||||
| 00004784 | |||||||||
| 00115639 | |||||||||
| 00115640 | |||||||||
| Ortholog (34) | |||||||||
| Paralog | WBGene00022856 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00009048 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | cbl-1 encodes a putative cystathionine gamma-lyase orthologous to human CTH (OMIM:607657, mutated in cystathioninuria), and paralogous to CTH-1 and CTH-2; CBL-1, unlike its paralog CTH-2, does not inhibit DHC-1 in vivo. | Paper_evidence | WBPaper00030897 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 15 Sep 2011 00:00:00 | ||||||||
| Automated_description | Predicted to enable carbon-sulfur lyase activity and pyridoxal phosphate binding activity. Predicted to be involved in transsulfuration. Predicted to be located in cytoplasm. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C12C8.2a | |||||||
| C12C8.2b | |||||||||
| Corresponding_CDS_history | C12C8.2:wp114 | ||||||||
| Corresponding_transcript | C12C8.2a.1 | ||||||||
| C12C8.2b.1 | |||||||||
| Other_sequence (71) | |||||||||
| Associated_feature | WBsf643578 | ||||||||
| WBsf984651 | |||||||||
| WBsf1010350 | |||||||||
| WBsf218270 | |||||||||
| WBsf218271 | |||||||||
| WBsf218272 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00028816 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00076114 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00002946 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00040373 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020008 | ||||||||
| Expr1033242 | |||||||||
| Expr1144435 | |||||||||
| Expr2009739 | |||||||||
| Expr2027979 | |||||||||
| Drives_construct | WBCnstr00033670 | ||||||||
| Construct_product | WBCnstr00033670 | ||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (267) | |||||||||
| SAGE_tag (13) | |||||||||
| Interaction (55) | |||||||||
| Map_info | Map | I | Position | 3.74609 | Error | 0.001417 | |||
| Positive | Positive_clone | C12C8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00040475 | |||||||||
| WBPaper00041771 | |||||||||
| WBPaper00042204 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065026 | |||||||||
| WBPaper00065331 | |||||||||
| WBPaper00065566 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
