WormBase Tree Display for Gene: WBGene00000968
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WBGene00000968 | SMap | S_parent | Sequence | T05F1 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | dhs-4 | Person_evidence | WBPerson651 | |||||
Sequence_name | T05F1.10 | ||||||||
Molecular_name | T05F1.10 | ||||||||
T05F1.10.1 | |||||||||
CE26900 | |||||||||
Other_name | CELE_T05F1.10 | Accession_evidence | NDB | BX284601 | |||||
Public_name | dhs-4 | ||||||||
DB_info | Database | AceView | gene | 1K224 | |||||
WormQTL | gene | WBGene00000968 | |||||||
WormFlux | gene | WBGene00000968 | |||||||
NDB | locus_tag | CELE_T05F1.10 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00000968|UniProtKB=O18030 | |||||||
family | PTHR24322 | ||||||||
NCBI | gene | 172810 | |||||||
RefSeq | protein | NM_060162.4 | |||||||
TrEMBL | UniProtAcc | O18030 | |||||||
UniProt_GCRP | UniProtAcc | O18030 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:22 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | dhs | ||||||||
Allele (15) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00031315 | ||||||||
00031316 | |||||||||
Ortholog (41) | |||||||||
Paralog (38) | |||||||||
Structured_description | Concise_description | dhs-4 encodes a short-chain dehydrogenase predicted to be mitochondrial. | Paper_evidence | WBPaper00004424 | |||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor. Predicted to be located in lipid droplet. Is an ortholog of human SDR16C5 (short chain dehydrogenase/reductase family 16C member 5). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T05F1.10 | |||||||
Corresponding_CDS_history | T05F1.10:wp43 | ||||||||
Corresponding_transcript | T05F1.10.1 | ||||||||
Other_sequence | CJC16619_1 | ||||||||
Acan_isotig23286 | |||||||||
Associated_feature | WBsf649503 | ||||||||
WBsf649504 | |||||||||
WBsf220120 | |||||||||
WBsf220121 | |||||||||
Experimental_info | RNAi_result | WBRNAi00052535 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00004136 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00035216 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00116667 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1012595 | ||||||||
Expr1030603 | |||||||||
Expr1156159 | |||||||||
Expr2010918 | |||||||||
Expr2029157 | |||||||||
Drives_construct | WBCnstr00037171 | ||||||||
Construct_product | WBCnstr00037171 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (170) | |||||||||
Interaction (65) | |||||||||
Map_info | Map | I | Position | 3.83164 | Error | 0.001704 | |||
Positive | Positive_clone | T05F1 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Mapping_data | Multi_point | 5019 | |||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00042257 | |||||||||
WBPaper00050916 | |||||||||
WBPaper00054299 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00064339 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |