WormBase Tree Display for Gene: WBGene00045400
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| WBGene00045400 | SMap | S_parent | Sequence | C54D10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C54D10.13 | |||||||
| Molecular_name | C54D10.13 | ||||||||
| C54D10.13.1 | |||||||||
| CE40929 | |||||||||
| Other_name | CELE_C54D10.13 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | C54D10.13 | ||||||||
| DB_info | Database | AceView | gene | 5M912 | |||||
| WormFlux | gene | WBGene00045400 | |||||||
| NDB | locus_tag | CELE_C54D10.13 | |||||||
| NCBI | gene | 6418712 | |||||||
| RefSeq | protein | NM_001129420.4 | |||||||
| TrEMBL | UniProtAcc | A5JYT8 | |||||||
| UniProt_GCRP | UniProtAcc | A5JYT8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 27 Apr 2007 09:41:21 | WBPerson4025 | Event | Split_from | WBGene00005249 | ||
| Split_from | WBGene00005249 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (47) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (19) | |||||||||
| Structured_description | Automated_description | Enriched in intestine; mechanosensory neurons; pharyngeal muscle cell; rectal gland cell; and somatic gonad precursor based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by four chemicals including stavudine; Sodium Chloride; and Cry5B based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Snake toxin-like superfamily. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C54D10.13 | |||||||
| Corresponding_transcript | C54D10.13.1 | ||||||||
| Other_sequence | CBC07682_1 | ||||||||
| Associated_feature | WBsf653220 | ||||||||
| WBsf234679 | |||||||||
| Experimental_info | Expr_pattern | Expr1019770 | |||||||
| Expr1147105 | |||||||||
| Expr2001911 | |||||||||
| Expr2020135 | |||||||||
| Drives_construct | WBCnstr00023237 | ||||||||
| Construct_product | WBCnstr00023237 | ||||||||
| Microarray_results | A_12_P113988 | ||||||||
| GPL13394_WBGene00045400 | |||||||||
| GPL13914_C54D10.13 | |||||||||
| GPL14144_C54D10.13_100-159_0.894_10_B | |||||||||
| GPL14144_C54D10.13_201-260_0.834_24_C | |||||||||
| GPL14144_C54D10.13_66-125_0.923_3_A | |||||||||
| GPL19516_CGZ0010492 | |||||||||
| GPL21109_C54D10.13 | |||||||||
| GPL8304_CE_WBGene00005249_A | |||||||||
| GPL8673_C54D10_6P01152 | |||||||||
| Expression_cluster (98) | |||||||||
| Map_info | Positive | Positive_clone | C54D10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 4.20993 | |||||||
| Method | Gene |
