WormBase Tree Display for Gene: WBGene00002067
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| WBGene00002067 | SMap | S_parent | Sequence | C43C3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | ifp-1 | |||||||
| Sequence_name | C43C3.1 | ||||||||
| Molecular_name | C43C3.1 | ||||||||
| C43C3.1.1 | |||||||||
| CE01523 | |||||||||
| Other_name | IF E1 | ||||||||
| CELE_C43C3.1 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | ifp-1 | ||||||||
| DB_info | Database | AceView | gene | XK296 | |||||
| WormQTL | gene | WBGene00002067 | |||||||
| WormFlux | gene | WBGene00002067 | |||||||
| NDB | locus_tag | CELE_C43C3.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00002067|UniProtKB=Q09501 | |||||||
| family | PTHR45721 | ||||||||
| NCBI | gene | 181182 | |||||||
| RefSeq | protein | NM_077227.8 | |||||||
| SwissProt | UniProtAcc | Q09501 | |||||||
| TREEFAM | TREEFAM_ID | TF316392 | |||||||
| UniProt_GCRP | UniProtAcc | Q09501 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ifp | ||||||||
| Allele (100) | |||||||||
| Strain | WBStrain00032110 | ||||||||
| WBStrain00032142 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (27) | |||||||||
| Paralog (12) | |||||||||
| Structured_description | Concise_description | ifp-1 encodes a nonessential intermediate filament protein; IFP-1 is predicted to function as a structural component of the cytoskeleton; IFP-1 has no obvious function in RNAi assays. | Paper_evidence | WBPaper00004651 | |||||
| WBPaper00004761 | |||||||||
| WBPaper00005654 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to be a structural constituent of cytoskeleton. Predicted to be involved in cellular localization; heterochromatin formation; and nucleus organization. Predicted to be located in nuclear envelope and nuclear lamina. Expressed in head; head neurons; intestine; pharynx; and ventral nerve cord. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C43C3.1 | |||||||
| Corresponding_transcript | C43C3.1.1 | ||||||||
| Other_sequence | CBC07359_1 | ||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00042369 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00007224 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062658 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00113723 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011878 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062659 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001853 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062657 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00098350 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00113719 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr3400 | ||||||||
| Expr3401 | |||||||||
| Expr13742 | |||||||||
| Expr13743 | |||||||||
| Expr15265 | |||||||||
| Expr1016212 | |||||||||
| Expr1031220 | |||||||||
| Expr1146355 | |||||||||
| Expr2012696 | |||||||||
| Expr2030932 | |||||||||
| Drives_construct | WBCnstr00011379 | ||||||||
| WBCnstr00036480 | |||||||||
| WBCnstr00039966 | |||||||||
| WBCnstr00039967 | |||||||||
| WBCnstr00042146 | |||||||||
| Construct_product | WBCnstr00036480 | ||||||||
| WBCnstr00039967 | |||||||||
| WBCnstr00042146 | |||||||||
| Antibody | WBAntibody00000798 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (255) | |||||||||
| Interaction (91) | |||||||||
| Map_info | Map | X | Position | 1.43346 | Error | 0.003538 | |||
| Positive | Positive_clone | C43C3 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 5573 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00004761 | ||||||||
| WBPaper00041022 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056033 | |||||||||
| WBPaper00056896 | |||||||||
| WBPaper00057758 | |||||||||
| WBPaper00059330 | |||||||||
| WBPaper00061750 | |||||||||
| WBPaper00065558 | |||||||||
| Remark | Sequence connection from [Karabinos A, Weber K]. krb 13/11/01 | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
