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WormBase Tree Display for Gene: WBGene00003773

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Name Class

WBGene00003773SMapS_parentSequenceZK892
IdentityVersion1
NameCGC_namenlt-1Person_evidenceWBPerson247
Sequence_nameZK892.2
Molecular_nameZK892.2
ZK892.2.1
CE01725
Other_nameCELE_ZK892.2Accession_evidenceNDBBX284602
Public_namenlt-1
DB_infoDatabaseAceViewgene2K290
WormQTLgeneWBGene00003773
WormFluxgeneWBGene00003773
NDBlocus_tagCELE_ZK892.2
PanthergeneCAEEL|WormBase=WBGene00003773|UniProtKB=Q23655
familyPTHR10094
NCBIgene191734
RefSeqproteinNM_063760.6
SwissProtUniProtAccQ23655
TREEFAMTREEFAM_IDTF343860
UniProt_GCRPUniProtAccQ23655
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:32WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnlt
Allele (12)
StrainWBStrain00032126
RNASeq_FPKM (74)
GO_annotation00079239
00079240
Ortholog (30)
Structured_descriptionConcise_descriptionnlt-1 encodes a member of the SCP-2 sterol transfer family.Paper_evidenceWBPaper00019488
Curator_confirmedWBPerson48
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable lipid binding activity. Predicted to be located in cytosol. Is an ortholog of human SCP2D1 (SCP2 sterol binding domain containing 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSZK892.2
Corresponding_transcriptZK892.2.1
Other_sequence (42)
Associated_featureWBsf650474
WBsf650475
WBsf989205
WBsf223739
Experimental_infoRNAi_resultWBRNAi00092608Inferred_automaticallyRNAi_primary
WBRNAi00059799Inferred_automaticallyRNAi_primary
WBRNAi00038485Inferred_automaticallyRNAi_primary
WBRNAi00022211Inferred_automaticallyRNAi_primary
Expr_patternExpr1017319
Expr1031763
Expr1163231
Expr2014328
Expr2032569
Drives_constructWBCnstr00035875
Construct_productWBCnstr00035875
Microarray_results (18)
Expression_cluster (176)
InteractionWBInteraction000347201
WBInteraction000457050
WBInteraction000520267
WBInteraction000549914
WBInteraction000549919
WBInteraction000572441
WBInteraction000577650
WBInteraction000580201
Map_infoMapIIPosition1.82053Error0.000887
PositivePositive_cloneZK892Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point4537
5053
5451
Pseudo_map_position
ReferenceWBPaper00019488
WBPaper00038491
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene