WormBase Tree Display for Gene: WBGene00019599
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| WBGene00019599 | SMap | S_parent | Sequence | K09H11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | acds-10 | Person_evidence | WBPerson7217 | |||||
| Sequence_name | K09H11.1 | ||||||||
| Molecular_name | K09H11.1 | ||||||||
| K09H11.1.1 | |||||||||
| CE21068 | |||||||||
| Other_name | CELE_K09H11.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | acds-10 | ||||||||
| DB_info | Database | AceView | gene | 5G231 | |||||
| WormQTL | gene | WBGene00019599 | |||||||
| WormFlux | gene | WBGene00019599 | |||||||
| NDB | locus_tag | CELE_K09H11.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019599|UniProtKB=O01590 | |||||||
| family | PTHR48083 | ||||||||
| NCBI | gene | 178962 | |||||||
| RefSeq | protein | NM_072107.7 | |||||||
| TREEFAM | TREEFAM_ID | TF333953 | |||||||
| TrEMBL | UniProtAcc | O01590 | |||||||
| UniProt_GCRP | UniProtAcc | O01590 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 05 Apr 2017 11:17:23 | WBPerson2970 | Name_change | CGC_name | acds-10 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | acds | ||||||||
| Allele (81) | |||||||||
| Strain | WBStrain00002652 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00025103 | ||||||||
| 00025104 | |||||||||
| 00025105 | |||||||||
| 00025106 | |||||||||
| 00025107 | |||||||||
| 00025108 | |||||||||
| 00124411 | |||||||||
| 00124412 | |||||||||
| Ortholog (32) | |||||||||
| Paralog (22) | |||||||||
| Structured_description | Concise_description | K09H11.1 encodes an acyl CoA dehydrogenase; by homology, the product of K09H11.1 is predicted to function in fatty acid beta-oxidation; K09H11.1::yfp promoter fusions are expressed in the descendants of the tertiary vulval precursor cells P3.p, P4.p, and P8.p; large-scale expression studies reveal additional expression in the nervous system, intestine, and hypodermis. | Paper_evidence | WBPaper00026909 | |||||
| WBPaper00031006 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 20 Feb 2009 00:00:00 | ||||||||
| Automated_description | Predicted to enable acyl-CoA dehydrogenase activity. Predicted to be involved in fatty acid beta-oxidation using acyl-CoA dehydrogenase. Predicted to be located in cytoplasm. Expressed in P3.p hermaphrodite; P4.p hermaphrodite; and P8.p hermaphrodite. Is an ortholog of human ACAD10 (acyl-CoA dehydrogenase family member 10). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K09H11.1 | |||||||
| Corresponding_transcript | K09H11.1.1 | ||||||||
| Other_sequence (19) | |||||||||
| Associated_feature | WBsf646825 | ||||||||
| WBsf1000076 | |||||||||
| WBsf1000077 | |||||||||
| WBsf1000078 | |||||||||
| WBsf231796 | |||||||||
| WBsf231797 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00034221 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00016939 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00050457 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram281 | ||||||||
| Expr6377 | |||||||||
| Expr1018739 | |||||||||
| Expr1038462 | |||||||||
| Expr1154164 | |||||||||
| Expr2009141 | |||||||||
| Expr2027378 | |||||||||
| Marker18 | |||||||||
| Drives_construct | WBCnstr00000069 | ||||||||
| WBCnstr00003198 | |||||||||
| WBCnstr00025741 | |||||||||
| Construct_product | WBCnstr00025741 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (148) | |||||||||
| Interaction (34) | |||||||||
| Map_info | Map | V | Position | -1.01975 | |||||
| Positive | Positive_clone | K09H11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026909 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
