WormBase Tree Display for Gene: WBGene00000788
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| WBGene00000788 | Evidence | Paper_evidence | WBPaper00004821 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F32B5 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | cpz-1 | |||||||
| Sequence_name | F32B5.8 | ||||||||
| Molecular_name | F32B5.8a | ||||||||
| F32B5.8a.1 | |||||||||
| CE36646 | |||||||||
| F32B5.8b | |||||||||
| CE50019 | |||||||||
| F32B5.8b.1 | |||||||||
| Other_name | CELE_F32B5.8 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | cpz-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cpz | ||||||||
| Allele (65) | |||||||||
| Strain | WBStrain00031453 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (19) | |||||||||
| Ortholog (34) | |||||||||
| Paralog (28) | |||||||||
| Structured_description | Concise_description | cpz-1 encodes a homolog of cathepsin z-like cysteine protease cyclicallyexpressed in hypodermal cells throughout development (along with adultgonad and pharynx) and required for normal molting; CPZ-1 protein ispresent in cuticle regions shortly before their degradation duringecydsis, and this expression pattern is conserved in Onchocerca volvulus;cpz-1(ok497) and cpz-1(RNAi) worms have defective molting, along withmisshapen heads and tails, defective gonads, and embryonic lethality. | Paper_evidence | WBPaper00006379 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 21 Aug 2006 00:00:00 | ||||||||
| Automated_description | Predicted to enable cysteine-type endopeptidase activity. Involved in several processes, including ecdysis, collagen and cuticulin-based cuticle; gonad morphogenesis; and post-embryonic development. Located in collagen and cuticulin-based cuticle extracellular matrix; extracellular space; and yolk granule. Expressed in several structures, including anterior hypodermis; cuticle; intestine; pharynx; and vulva. Is an ortholog of human CTSZ (cathepsin Z). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F32B5.8a | |||||||
| F32B5.8b | |||||||||
| Corresponding_CDS_history | F32B5.8:wp123 | ||||||||
| Corresponding_transcript | F32B5.8a.1 | ||||||||
| F32B5.8b.1 | |||||||||
| Other_sequence (237) | |||||||||
| Associated_feature | WBsf648984 | ||||||||
| WBsf717464 | |||||||||
| WBsf980972 | |||||||||
| WBsf982941 | |||||||||
| WBsf1009378 | |||||||||
| WBsf219056 | |||||||||
| Experimental_info | RNAi_result (12) | ||||||||
| Expr_pattern | Expr2400 | ||||||||
| Expr2892 | |||||||||
| Expr2893 | |||||||||
| Expr7868 | |||||||||
| Expr1014352 | |||||||||
| Expr1030489 | |||||||||
| Expr1149993 | |||||||||
| Expr2010522 | |||||||||
| Expr2028762 | |||||||||
| Drives_construct | WBCnstr00010810 | ||||||||
| WBCnstr00011010 | |||||||||
| WBCnstr00019867 | |||||||||
| WBCnstr00037275 | |||||||||
| Construct_product | WBCnstr00037275 | ||||||||
| Antibody | WBAntibody00000710 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (228) | |||||||||
| Interaction (23) | |||||||||
| Map_info | Map | I | Position | -7.97279 | Error | 0.169868 | |||
| Positive | Positive_clone | F32B5 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4238 | |||||||
| 5249 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00006379 | ||||||||
| WBPaper00010400 | |||||||||
| WBPaper00027761 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059755 | |||||||||
| WBPaper00062444 | |||||||||
| WBPaper00064339 | |||||||||
| WBPaper00065026 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Homolog of Ov-cpz-1 | Paper_evidence | WBPaper00004821 | |||||||
| Method | Gene |
