WormBase Tree Display for Gene: WBGene00012777

WBGene00012777 SMap: S_parent: Sequence: Y42A5A
  Identity: Version: 2
    Name: CGC_name: lact-8 Person_evidence: WBPerson168
      Sequence_name: Y42A5A.2
      Molecular_name: Y42A5A.2a
        Y42A5A.2a.1
        CE43119
        Y42A5A.2b
        CE45998
        Y42A5A.2c
        CE46035
        Y42A5A.2b.1
        Y42A5A.2c.1
      Other_name: CELE_Y42A5A.2 Accession_evidence: NDB BX284605
      Public_name: lact-8
    DB_info: Database: AceView gene 5L568
        WormQTL gene WBGene00012777
        WormFlux gene WBGene00012777
        NDB locus_tag CELE_Y42A5A.2
        Panther gene CAEEL|WormBase=WBGene00012777|UniProtKB=Q9XWZ6
          family PTHR46825
        NCBI gene 189839
        RefSeq protein NM_001269357.3
            NM_001269359.3
            NM_001269358.3
        TREEFAM TREEFAM_ID TF315050
        TrEMBL UniProtAcc F3Y5Q9
            Q9XWZ6
            F3Y5Q8
        UniProt_GCRP UniProtAcc Q9XWZ6
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 13 Apr 2007 16:02:30 WBPerson2970 Name_change: CGC_name: lact-8
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lact
    Allele (53)
    Strain: WBStrain00037741
    RNASeq_FPKM (74)
    Ortholog (24)
    Paralog: WBGene00008047 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00012890 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
    Structured_description: Concise_description: lact-8 encodes a beta-lactamase domain-containing protein that contains a predicted transmembrane domain in its N terminus. Curator_confirmed: WBPerson1843
          Date_last_updated: 18 Dec 2007 00:00:00
      Automated_description: Enriched in several structures, including ABarpaapap; ABarpaappa; ABarpaappp; anterior hypodermis; and carbon dioxide sensory neurons based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray and RNA-seq studies. Is affected by twelve chemicals including levamisole; allantoin; and Sirolimus based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Beta-lactamase-related; Beta-lactamase; and Beta-lactamase/transpeptidase-like. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y42A5A.2a
      Y42A5A.2b
      Y42A5A.2c
    Corresponding_CDS_history: Y42A5A.2:wp195
    Corresponding_transcript: Y42A5A.2a.1
      Y42A5A.2b.1
      Y42A5A.2c.1
    Other_sequence: HBC25388_1
      JI178465.1
      Dviv_isotig29914
      ES743304.1
    Associated_feature: WBsf653076
      WBsf669356
      WBsf1001266
  Experimental_info: RNAi_result: WBRNAi00056428 Inferred_automatically: RNAi_primary
      WBRNAi00095078 Inferred_automatically: RNAi_primary
      WBRNAi00020511 Inferred_automatically: RNAi_primary
      WBRNAi00056425 Inferred_automatically: RNAi_primary
      WBRNAi00037016 Inferred_automatically: RNAi_primary
      WBRNAi00037017 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1011809
      Expr1035654
      Expr1159909
      Expr2013000
      Expr2031232
    Drives_construct: WBCnstr00029848
    Construct_product: WBCnstr00029848
    Microarray_results (20)
    Expression_cluster (146)
    Interaction (18)
  Map_info: Map: V Position: 2.94611 Error: 0.000565
    Positive: Positive_clone: Y42A5A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene