WormBase Tree Display for Gene: WBGene00003643
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| WBGene00003643 | Evidence | Paper_evidence | WBPaper00003416 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | K06B4 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | nhr-53 | Person_evidence | WBPerson600 | |||||
| Sequence_name | K06B4.11 | ||||||||
| Molecular_name | K06B4.11 | ||||||||
| K06B4.11.1 | |||||||||
| CE27770 | |||||||||
| Other_name | CELE_K06B4.11 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nhr-53 | ||||||||
| DB_info | Database | AceView | gene | 5Q182 | |||||
| WormQTL | gene | WBGene00003643 | |||||||
| WormFlux | gene | WBGene00003643 | |||||||
| NDB | locus_tag | CELE_K06B4.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003643|UniProtKB=O17933 | |||||||
| family | PTHR46011 | ||||||||
| NCBI | gene | 180053 | |||||||
| RefSeq | protein | NM_171556.5 | |||||||
| SwissProt | UniProtAcc | O17933 | |||||||
| TREEFAM | TREEFAM_ID | TF315401 | |||||||
| UniProt_GCRP | UniProtAcc | O17933 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (39) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (23) | |||||||||
| Paralog (218) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K06B4.11 | |||||||
| Corresponding_CDS_history | K06B4.11:wp51 | ||||||||
| Corresponding_transcript | K06B4.11.1 | ||||||||
| Other_sequence | CR10232 | ||||||||
| CR10231 | |||||||||
| CRC01542_1 | |||||||||
| Associated_feature | WBsf655612 | ||||||||
| WBsf669778 | |||||||||
| WBsf669779 | |||||||||
| WBsf717283 | |||||||||
| WBsf1002336 | |||||||||
| WBsf1021052 | |||||||||
| WBsf235079 | |||||||||
| Transcription_factor | WBTranscriptionFactor000551 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00050039 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00034011 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019730 | ||||||||
| Expr1031686 | |||||||||
| Expr1153733 | |||||||||
| Expr2014203 | |||||||||
| Expr2032444 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (122) | |||||||||
| Interaction (27) | |||||||||
| Map_info | Map | V | Position | 8.67205 | Error | 0.002382 | |||
| Positive | Positive_clone | K06B4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5006 | |||||||
| 5402 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
