WormBase Tree Display for Gene: WBGene00008542

WBGene00008542 SMap: S_parent: Sequence: F07A5
  Identity: Version: 2
    Name: CGC_name: scav-6
      Sequence_name: F07A5.3
      Molecular_name: F07A5.3
        F07A5.3.1
        CE05556
      Other_name: CELE_F07A5.3 Accession_evidence: NDB BX284601
      Public_name: scav-6
    DB_info: Database: AceView gene 1H935
        WormQTL gene WBGene00008542
        WormFlux gene WBGene00008542
        NDB locus_tag CELE_F07A5.3
        Panther gene CAEEL|WormBase=WBGene00008542|UniProtKB=Q19140
          family PTHR11923
        NCBI gene 184107
        RefSeq protein NM_059680.6
        TrEMBL UniProtAcc Q19140
        UniProt_GCRP UniProtAcc Q19140
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 08 Mar 2010 11:14:55 WBPerson2970 Name_change: CGC_name: scav-6
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: scav
    Allele (38)
    RNASeq_FPKM (74)
    GO_annotation: 00063644
      00063645
      00063646
      00063647
      00116429
    Ortholog (46)
    Paralog: WBGene00015389 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00013039 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00013578 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00011076 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00008692 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable scavenger receptor activity. Predicted to be involved in endocytosis. Predicted to be located in cytoplasm. Is an ortholog of human SCARB1 (scavenger receptor class B member 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F07A5.3
    Corresponding_transcript: F07A5.3.1
    Other_sequence: Acan_isotig10737
      ACC16041_1
      FC551589.1
      Dviv_isotig13385
      CBC06372_1
      EX914354.1
      FC551042.1
      HBC15354_1
      Dviv_isotig13386
      Dviv_isotig13384
    Associated_feature: WBsf643447
      WBsf643448
      WBsf218001
  Experimental_info: RNAi_result: WBRNAi00078838 Inferred_automatically: RNAi_primary
      WBRNAi00003329 Inferred_automatically: RNAi_primary
      WBRNAi00043849 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1022719
      Expr1033721
      Expr1147825
      Expr2015619
      Expr2033854
    Drives_construct: WBCnstr00032884
    Construct_product: WBCnstr00032884
    Microarray_results (18)
    Expression_cluster (201)
  Map_info: Map: I Position: 1.9626 Error: 0.006798
    Positive: Positive_clone: F07A5 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00010266
    WBPaper00018248
    WBPaper00018249
    WBPaper00032930
    WBPaper00038491
    WBPaper00055090
    WBPaper00065146
    WBPaper00065331
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene