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WormBase Tree Display for Gene: WBGene00013560

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Name Class

WBGene00013560SMapS_parentSequenceY75B8A
IdentityVersion3
NameCGC_namezip-12Person_evidenceWBPerson260
WBPerson460
Sequence_nameY75B8A.29
Molecular_nameY75B8A.29
Y75B8A.29.1
CE23040
Y75B8A.29.2
Other_nameCELE_Y75B8A.29Accession_evidenceNDBBX284603
Public_namezip-12
DB_infoDatabaseAceViewgene3N421
WormQTLgeneWBGene00013560
WormFluxgeneWBGene00013560
NDBlocus_tagCELE_Y75B8A.29
NCBIgene176655
RefSeqproteinNM_001383009.2
TREEFAMTREEFAM_IDTF316233
TrEMBLUniProtAccQ9XW80
UniProt_GCRPUniProtAccQ9XW80
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:55WBPerson1971EventImportedInitial conversion from CDS class of WS125
223 Sep 2011 16:44:07WBPerson2970Name_changeCGC_namezip-12
302 Mar 2018 11:09:16WBPerson4025EventSplit_intoWBGene00303096
Split_intoWBGene00303096
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classzip
Allele (118)
StrainWBStrain00036375
RNASeq_FPKM (74)
Ortholog (21)
Structured_descriptionAutomated_descriptionEnriched in several structures, including ABarpaapap; ABarpaappa; ABarpaappp; ABarppaapa; and mechanosensory neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and dpy-10 based on microarray and RNA-seq studies. Is affected by twelve chemicals including 1-methylnicotinamide; levamisole; and Zidovudine based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY75B8A.29
Corresponding_CDS_historyY75B8A.29a:wp264
Y75B8A.29b:wp264
Corresponding_transcriptY75B8A.29.1
Y75B8A.29.2
Other_sequenceCJC16109_1
Associated_featureWBsf645655
WBsf645656
WBsf645657
WBsf659605
WBsf659606
WBsf716558
WBsf981616
WBsf994616
WBsf1016176
Transcription_factorWBTranscriptionFactor000641
Experimental_infoRNAi_resultWBRNAi00006814Inferred_automaticallyRNAi_primary
WBRNAi00058459Inferred_automaticallyRNAi_primary
WBRNAi00021447Inferred_automaticallyRNAi_primary
WBRNAi00115796Inferred_automaticallyRNAi_primary
WBRNAi00037845Inferred_automaticallyRNAi_primary
Expr_patternExpr1022460
Expr1036060
Expr1161875
Expr2018154
Expr2036291
Microarray_results (20)
Expression_cluster (163)
Interaction (16)
Map_infoMapIIIPosition16.401Error0.017112
PositivePositive_cloneY75B8AInferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00027309
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene