WormBase Tree Display for Gene: WBGene00007680
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| WBGene00007680 | SMap | S_parent | Sequence | C18D11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | maa-1 | |||||||
| Sequence_name | C18D11.2 | ||||||||
| Molecular_name | C18D11.2 | ||||||||
| C18D11.2.1 | |||||||||
| CE18513 | |||||||||
| Other_name | CELE_C18D11.2 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | maa-1 | ||||||||
| DB_info | Database | AceView | gene | 3M910 | |||||
| WormQTL | gene | WBGene00007680 | |||||||
| WormFlux | gene | WBGene00007680 | |||||||
| NDB | locus_tag | CELE_C18D11.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007680|UniProtKB=Q9XTZ5 | |||||||
| family | PTHR23310 | ||||||||
| NCBI | gene | 176612 | |||||||
| RefSeq | protein | NM_067130.6 | |||||||
| TREEFAM | TREEFAM_ID | TF319446 | |||||||
| TrEMBL | UniProtAcc | Q9XTZ5 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XTZ5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 02 Jul 2004 16:55:44 | WBPerson1971 | Name_change | CGC_name | maa-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | maa | ||||||||
| Allele (57) | |||||||||
| Strain | WBStrain00032337 | ||||||||
| WBStrain00035474 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (17) | |||||||||
| Ortholog (38) | |||||||||
| Paralog | WBGene00001153 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00016655 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00044603 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00018949 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00009818 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00012457 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Concise_description | maa-1 encodes a novel, transmembrane acyl-CoA-binding protein; maa-1 activity, together with that of rme-1, is required for normal rates of endosomal recycling and for proper endosomal shape and morphology; a rescuing MAA-1::GFP fusion protein is expressed in the hypodermis (excluding the seam cells) and the intestine, as well as in an area near the dorsal and ventral nerve cords; within the hypodermis and intestine, MAA-1::GFP localizes to endosomal and Golgi vesicle membranes. | Paper_evidence | WBPaper00028338 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 20 Feb 2008 00:00:00 | ||||||||
| Automated_description | Enables fatty-acyl-CoA binding activity. Involved in endocytic recycling; endosome organization; and multicellular organism reproduction. Located in apical part of cell; basal part of cell; and bounding membrane of organelle. Expressed in hypodermis. Is an ortholog of human ACBD4 (acyl-CoA binding domain containing 4). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C18D11.2 | |||||||
| Corresponding_transcript | C18D11.2.1 | ||||||||
| Other_sequence | CRC10935_1 | ||||||||
| CBC05789_1 | |||||||||
| CJC13489_1 | |||||||||
| ACC00514_1 | |||||||||
| CR04599 | |||||||||
| Associated_feature | WBsf651519 | ||||||||
| WBsf227602 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00010998 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00006289 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029068 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00040923 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr8267 | ||||||||
| Expr1028301 | |||||||||
| Expr1033316 | |||||||||
| Expr1144969 | |||||||||
| Expr2013321 | |||||||||
| Expr2031553 | |||||||||
| Drives_construct | WBCnstr00013222 | ||||||||
| Construct_product | WBCnstr00013222 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (138) | |||||||||
| Interaction | WBInteraction000008868 | ||||||||
| WBInteraction000336528 | |||||||||
| Map_info | Map | III | Position | 13.2516 | Error | 0.003717 | |||
| Positive | Positive_clone | C18D11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024788 | ||||||||
| WBPaper00025957 | |||||||||
| WBPaper00027024 | |||||||||
| WBPaper00027392 | |||||||||
| WBPaper00028338 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00052849 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00062625 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
