WormBase Tree Display for Gene: WBGene00016958
expand all nodes | collapse all nodes | view schema
| WBGene00016958 | SMap | S_parent | Sequence | C55F2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ilys-4 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | C55F2.2 | ||||||||
| Molecular_name | C55F2.2 | ||||||||
| C55F2.2.1 | |||||||||
| CE31458 | |||||||||
| C55F2.2.2 | |||||||||
| Other_name | CELE_C55F2.2 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | ilys-4 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 18 May 2007 16:58:23 | WBPerson2970 | Name_change | CGC_name | ilys-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ilys | ||||||||
| Allele (19) | |||||||||
| Strain | WBStrain00047432 | ||||||||
| WBStrain00047551 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00092861 | ||||||||
| 00092862 | |||||||||
| 00092863 | |||||||||
| 00092864 | |||||||||
| 00092865 | |||||||||
| 00092866 | |||||||||
| 00092867 | |||||||||
| 00122462 | |||||||||
| Ortholog (24) | |||||||||
| Paralog | WBGene00016668 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00016669 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00016670 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00017691 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020982 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable lysozyme activity. Predicted to be involved in defense response to bacterium and killing of cells of another organism. Expressed in DD neuron and neurons. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C55F2.2 | |||||||
| Corresponding_CDS_history | C55F2.2:wp82 | ||||||||
| Corresponding_transcript | C55F2.2.1 | ||||||||
| C55F2.2.2 | |||||||||
| Other_sequence (32) | |||||||||
| Associated_feature | WBsf651962 | ||||||||
| WBsf230347 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00043248 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00012444 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00070755 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00002195 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00097919 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043247 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00070757 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00070756 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr10604 | ||||||||
| Expr13077 | |||||||||
| Expr1010634 | |||||||||
| Expr1037274 | |||||||||
| Expr1147228 | |||||||||
| Expr2012722 | |||||||||
| Expr2030959 | |||||||||
| Drives_construct | WBCnstr00017034 | ||||||||
| WBCnstr00027679 | |||||||||
| WBCnstr00038571 | |||||||||
| Construct_product | WBCnstr00027679 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (185) | |||||||||
| Interaction | WBInteraction000007986 | ||||||||
| WBInteraction000007987 | |||||||||
| Map_info | Map | IV | Position | 3.49561 | Error | 0.000241 | |||
| Positive | Positive_clone | C55F2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031802 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
